Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGB1P09429 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGB1P09429 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB1P09429 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HMGB1P09429 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB1P09429 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB1P09429 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB1P09429 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
HMGB1P09429 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
HMGB1P09429 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P09429 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P09429 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P09429 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P09429 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P09429 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P09429 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 AC005517.2-201ENST00000424673 553 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P09429 AC092634.2-201ENST00000428146 1010 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGB1P09429 AL133445.1-201ENST00000467051 452 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 AC069304.1-201ENST00000491593 704 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 AC025674.1-201ENST00000507074 324 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 AC007016.1-201ENST00000512110 244 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 MTCO1P24-201ENST00000515438 1558 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 AC104057.1-201ENST00000515547 497 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGB1P09429 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
HMGB1P09429 CYCSP28-201ENST00000534284 321 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.29□□□□□ -1.4
HMGB1P09429 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB1P09429 AC122134.1-202ENST00000569111 1201 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 AGGF1P6-201ENST00000569213 976 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P09429 AP005137.2-201ENST00000609238 400 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P09429 AC073136.1-201ENST00000449426 2884 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB1P09429 MAPK10-349ENST00000641767 3661 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMGB1P09429 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMGB1P09429 AC023421.1-201ENST00000590535 1785 ntBASIC6.29□□□□□ -1.4
HMGB1P09429 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P09429 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P09429 AL138820.1-201ENST00000617901 5305 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
HMGB1P09429 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB1P09429 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P09429 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P09429 RNA5SP339-201ENST00000390987 122 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
HMGB1P09429 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.28□□□□□ -1.4
HMGB1P09429 IFNNP1-201ENST00000429219 553 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB1P09429 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.28□□□□□ -1.4
HMGB1P09429 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.28□□□□□ -1.4
HMGB1P09429 NPM1P13-201ENST00000452663 865 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 HMGB3P30-201ENST00000457863 606 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB1P09429 RPL7P51-201ENST00000490532 749 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 RN7SL547P-201ENST00000490793 290 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 RNU6-885P-201ENST00000516607 104 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB1P09429 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB1P09429 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB1P09429 AC027369.5-201ENST00000533838 755 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HMGB1P09429 AC092470.1-201ENST00000546187 132 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 AC087897.1-201ENST00000550134 156 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.28□□□□□ -1.4
HMGB1P09429 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB1P09429 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HMGB1P09429 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.28□□□□□ -1.4
HMGB1P09429 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB1P09429 AC112230.1-201ENST00000604342 547 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 HMGN2P28-201ENST00000606102 262 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB1P09429 U73479.1-201ENST00000618062 168 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 AC091932.2-201ENST00000623014 291 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 AC090506.2-201ENST00000624521 419 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 PNPT1P2-201ENST00000456768 2050 ntBASIC6.28□□□□□ -1.4
HMGB1P09429 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HMGB1P09429 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P09429 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P09429 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB1P09429 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.27□□□□□ -1.4
HMGB1P09429 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGB1P09429 AL672167.1-205ENST00000641112 3080 ntBASIC6.27□□□□□ -1.41
HMGB1P09429 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB1P09429 CASC19-206ENST00000641028 1430 ntBASIC6.27□□□□□ -1.41
HMGB1P09429 OR51H2P-202ENST00000641424 3046 ntBASIC6.27□□□□□ -1.41
HMGB1P09429 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
HMGB1P09429 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGB1P09429 RNU6-582P-201ENST00000362989 107 ntBASIC6.27□□□□□ -1.41
HMGB1P09429 RNU6-115P-201ENST00000364310 107 ntBASIC6.27□□□□□ -1.41
HMGB1P09429 RNA5SP455-201ENST00000365190 119 ntBASIC6.27□□□□□ -1.41
HMGB1P09429 RNU6-921P-201ENST00000384361 107 ntBASIC6.27□□□□□ -1.41
HMGB1P09429 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HMGB1P09429 AL139098.1-201ENST00000407291 389 ntBASIC6.27□□□□□ -1.41
HMGB1P09429 AL390774.1-201ENST00000411924 246 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms