Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.83□□□□□ -1.64
GPC4O75487 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 AC073310.1-201ENST00000423226 1033 ntBASIC4.83□□□□□ -1.64
GPC4O75487 EIF4HP2-201ENST00000424380 563 ntBASIC4.83□□□□□ -1.64
GPC4O75487 RPL7P29-201ENST00000437151 728 ntBASIC4.83□□□□□ -1.64
GPC4O75487 PTMAP6-201ENST00000439110 327 ntBASIC4.83□□□□□ -1.64
GPC4O75487 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 MRPL48P1-201ENST00000445390 636 ntBASIC4.83□□□□□ -1.64
GPC4O75487 AC000111.2-201ENST00000448200 210 ntBASIC4.83□□□□□ -1.64
GPC4O75487 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GPC4O75487 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC4O75487 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.83□□□□□ -1.64
GPC4O75487 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 AC008033.2-201ENST00000542626 177 ntBASIC4.83□□□□□ -1.64
GPC4O75487 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC4O75487 AL121594.4-201ENST00000556211 1196 ntBASIC4.83□□□□□ -1.64
GPC4O75487 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC4O75487 AC007448.1-201ENST00000582714 234 ntBASIC4.83□□□□□ -1.64
GPC4O75487 RN7SL52P-201ENST00000584271 284 ntBASIC4.83□□□□□ -1.64
GPC4O75487 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC4O75487 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC4O75487 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC4O75487 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 AC124856.1-201ENST00000600819 896 ntBASIC4.83□□□□□ -1.64
GPC4O75487 AC133552.5-201ENST00000604266 540 ntBASIC4.83□□□□□ -1.64
GPC4O75487 LINC00901.1-201ENST00000617252 152 ntBASIC4.83□□□□□ -1.64
GPC4O75487 AL512427.1-201ENST00000618593 349 ntBASIC4.83□□□□□ -1.64
GPC4O75487 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
GPC4O75487 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC4O75487 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC4O75487 MAPK10-303ENST00000641324 3959 ntBASIC4.83□□□□□ -1.64
GPC4O75487 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GPC4O75487 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC4O75487 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
GPC4O75487 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
GPC4O75487 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 INTS6P1-201ENST00000504674 2530 ntBASIC4.82□□□□□ -1.64
GPC4O75487 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.82□□□□□ -1.64
GPC4O75487 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.82□□□□□ -1.64
GPC4O75487 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
GPC4O75487 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 RNA5SP123-201ENST00000363244 119 ntBASIC4.82□□□□□ -1.64
GPC4O75487 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.82□□□□□ -1.64
GPC4O75487 AL109941.1-201ENST00000401925 229 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AL357515.1-201ENST00000402967 542 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AP000580.1-201ENST00000404439 358 ntBASIC4.82□□□□□ -1.64
GPC4O75487 RNA5SP345-201ENST00000410646 108 ntBASIC4.82□□□□□ -1.64
GPC4O75487 GTF2IP5-201ENST00000414608 731 ntBASIC4.82□□□□□ -1.64
GPC4O75487 CHEK2P3-201ENST00000416118 248 ntBASIC4.82□□□□□ -1.64
GPC4O75487 CKS1BP6-201ENST00000424932 240 ntBASIC4.82□□□□□ -1.64
GPC4O75487 BRWD1P3-201ENST00000428816 390 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.82□□□□□ -1.64
GPC4O75487 RPS7P2-201ENST00000435134 607 ntBASIC4.82□□□□□ -1.64
GPC4O75487 MED6P1-201ENST00000439659 713 ntBASIC4.82□□□□□ -1.64
GPC4O75487 HMGB3P9-201ENST00000441799 583 ntBASIC4.82□□□□□ -1.64
GPC4O75487 FHP1-201ENST00000442741 703 ntBASIC4.82□□□□□ -1.64
GPC4O75487 OTX2P1-201ENST00000450956 354 ntBASIC4.82□□□□□ -1.64
GPC4O75487 RN7SL329P-201ENST00000467740 299 ntBASIC4.82□□□□□ -1.64
GPC4O75487 METTL15P1-201ENST00000481421 1045 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC005912.1-201ENST00000495392 255 ntBASIC4.82□□□□□ -1.64
GPC4O75487 MTND1P6-201ENST00000523621 946 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC4O75487 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.82□□□□□ -1.64
GPC4O75487 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.82□□□□□ -1.64
GPC4O75487 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 AC068714.1-201ENST00000559623 800 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC4O75487 MIR4789-201ENST00000577469 82 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC023762.1-201ENST00000603280 584 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC010424.2-201ENST00000607594 443 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC211433.2-201ENST00000608433 387 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC096586.1-201ENST00000610267 561 ntBASIC4.82□□□□□ -1.64
GPC4O75487 MIR7973-1-201ENST00000614683 76 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AL121890.2-201ENST00000617644 465 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC015726.3-201ENST00000624501 418 ntBASIC4.82□□□□□ -1.64
GPC4O75487 AC010608.3-201ENST00000625048 527 ntBASIC4.82□□□□□ -1.64
GPC4O75487 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
GPC4O75487 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 MAPK10-286ENST00000641208 8747 ntBASIC4.82□□□□□ -1.64
GPC4O75487 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GPC4O75487 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
GPC4O75487 AL133268.1-201ENST00000405676 1401 ntBASIC4.81□□□□□ -1.64
GPC4O75487 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
GPC4O75487 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
GPC4O75487 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC4O75487 RNU5B-4P-201ENST00000363508 111 ntBASIC4.81□□□□□ -1.64
GPC4O75487 RN7SKP224-201ENST00000364140 325 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms