Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
ZIC3O60481 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
ZIC3O60481 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 MTND4P10-201ENST00000446199 1363 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 MTCO1P6-201ENST00000481192 1384 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 TRIM51GP-201ENST00000534741 1350 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
ZIC3O60481 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.53□□□□□ -1.68
ZIC3O60481 DDX18P4-201ENST00000511690 1966 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.53□□□□□ -1.68
ZIC3O60481 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 RNU6-1339P-201ENST00000363574 91 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ZIC3O60481 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.53□□□□□ -1.68
ZIC3O60481 CHEK2P3-201ENST00000416118 248 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 Z75741.2-201ENST00000417272 1167 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.53□□□□□ -1.68
ZIC3O60481 OR5M12P-201ENST00000423388 929 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC010099.3-201ENST00000423896 409 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.53□□□□□ -1.68
ZIC3O60481 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.53□□□□□ -1.68
ZIC3O60481 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.53□□□□□ -1.68
ZIC3O60481 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.53□□□□□ -1.68
ZIC3O60481 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.53□□□□□ -1.68
ZIC3O60481 AC091959.2-201ENST00000477363 321 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC069528.1-202ENST00000482888 637 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AL049874.2-201ENST00000492636 288 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC231760.1-201ENST00000498002 260 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.53□□□□□ -1.68
ZIC3O60481 AC005351.1-201ENST00000511152 786 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.53□□□□□ -1.68
ZIC3O60481 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.53□□□□□ -1.68
ZIC3O60481 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.53□□□□□ -1.68
ZIC3O60481 AC138832.1-201ENST00000522871 556 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AL358913.1-201ENST00000554342 121 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
ZIC3O60481 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.53□□□□□ -1.68
ZIC3O60481 MTND4LP24-201ENST00000572277 291 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.53□□□□□ -1.68
ZIC3O60481 AC011840.5-201ENST00000582125 771 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC069366.1-201ENST00000583159 838 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.53□□□□□ -1.68
ZIC3O60481 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.53□□□□□ -1.68
ZIC3O60481 AC011487.3-201ENST00000593607 453 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.53□□□□□ -1.68
ZIC3O60481 AL583856.2-201ENST00000606298 543 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC016877.3-201ENST00000606778 504 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC092954.1-201ENST00000609121 445 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 BX323046.1-201ENST00000610145 535 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.53□□□□□ -1.68
ZIC3O60481 AC074140.1-201ENST00000621617 208 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AP002782.1-201ENST00000623107 614 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AP003485.2-201ENST00000623636 610 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 CU459211.1-201ENST00000635667 749 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.53□□□□□ -1.68
ZIC3O60481 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.53□□□□□ -1.68
ZIC3O60481 TTC39DP-201ENST00000416781 1688 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 AC138393.1-206ENST00000540997 1886 ntBASIC4.53□□□□□ -1.68
ZIC3O60481 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.53□□□□□ -1.68
ZIC3O60481 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
ZIC3O60481 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.53□□□□□ -1.68
ZIC3O60481 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZIC3O60481 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
ZIC3O60481 HSPA8P17-201ENST00000427029 1382 ntBASIC4.53□□□□□ -1.69
ZIC3O60481 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.53□□□□□ -1.69
ZIC3O60481 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZIC3O60481 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.52□□□□□ -1.69
ZIC3O60481 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZIC3O60481 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.52□□□□□ -1.69
ZIC3O60481 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZIC3O60481 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZIC3O60481 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 SNORA70.10-201ENST00000384515 134 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 MIR550A3-201ENST00000390735 95 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 PEX12P1-201ENST00000400284 1048 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 RN7SKP16-201ENST00000410180 299 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 AF186996.5-201ENST00000418098 904 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.52□□□□□ -1.69
ZIC3O60481 OR2AM1P-201ENST00000422137 422 ntBASIC4.52□□□□□ -1.69
ZIC3O60481 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.52□□□□□ -1.69
ZIC3O60481 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.52□□□□□ -1.69
ZIC3O60481 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms