Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PHGDHO43175 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 AP000776.1-201ENST00000530032 1663 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 FAM3C2-201ENST00000312214 681 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 RNA5SP122-201ENST00000384457 108 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 SNORA48.4-201ENST00000391089 134 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AL133388.1-201ENST00000404509 287 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 OR4K12P-201ENST00000406538 961 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 RPL6P29-201ENST00000414863 865 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 RPL7P44-201ENST00000424827 742 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AL365396.1-201ENST00000430854 671 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.29□□□□□ -1.56
PHGDHO43175 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.29□□□□□ -1.56
PHGDHO43175 AC092013.1-201ENST00000438795 332 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.29□□□□□ -1.56
PHGDHO43175 NOP56P2-201ENST00000447491 769 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 Z99714.1-201ENST00000450463 807 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 RPL7P41-201ENST00000485823 957 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.29□□□□□ -1.56
PHGDHO43175 Y_RNA.688-201ENST00000516565 95 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 GCSHP4-201ENST00000538792 439 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.29□□□□□ -1.56
PHGDHO43175 HIGD1AP17-201ENST00000554576 276 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.29□□□□□ -1.56
PHGDHO43175 GTF2IP8-201ENST00000560687 584 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.29□□□□□ -1.56
PHGDHO43175 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.29□□□□□ -1.56
PHGDHO43175 AC079171.1-201ENST00000568788 914 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AC010547.6-201ENST00000571789 193 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.29□□□□□ -1.56
PHGDHO43175 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.29□□□□□ -1.56
PHGDHO43175 VIS1.1-201ENST00000610517 203 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 AC234782.5-201ENST00000617723 324 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.29□□□□□ -1.56
PHGDHO43175 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.29□□□□□ -1.56
PHGDHO43175 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.29□□□□□ -1.56
PHGDHO43175 AC011755.1-201ENST00000623763 2049 ntBASIC5.29□□□□□ -1.56
PHGDHO43175 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.29□□□□□ -1.56
PHGDHO43175 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHGDHO43175 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.29□□□□□ -1.56
PHGDHO43175 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 AC006484.1-201ENST00000435086 1884 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 AC109315.1-201ENST00000584143 1347 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 SMG1P4-204ENST00000523028 4131 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AC073136.1-201ENST00000449426 2884 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PHGDHO43175 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 RNU6-1151P-201ENST00000384684 107 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 RNU6-1300P-201ENST00000391046 108 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.28□□□□□ -1.56
PHGDHO43175 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 RNU6-757P-201ENST00000410334 100 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 RNU2-50P-201ENST00000410494 143 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AL161449.1-201ENST00000414531 1199 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 Z93019.1-201ENST00000416450 973 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AC009518.2-201ENST00000418056 731 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC009965.2-201ENST00000425328 970 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AC007559.1-201ENST00000428736 355 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 TXNL1P1-201ENST00000429528 554 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AC002504.1-201ENST00000438281 691 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.28□□□□□ -1.56
PHGDHO43175 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC105399.1-202ENST00000447303 205 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 RPS27AP15-201ENST00000447672 466 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.28□□□□□ -1.56
PHGDHO43175 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC108161.1-201ENST00000461060 402 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms