Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 AC125611.2-201ENST00000551907 647 ntBASIC6.51□□□□□ -1.37
SOX1O00570 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX1O00570 AC096996.1-201ENST00000563813 325 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AC012254.3-201ENST00000591183 2117 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.51□□□□□ -1.37
SOX1O00570 FAM25E-202ENST00000608562 189 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AC019193.2-201ENST00000610012 634 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AL021918.2-201ENST00000613415 194 ntBASIC6.51□□□□□ -1.37
SOX1O00570 MIR8089-201ENST00000620165 82 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AC091953.3-201ENST00000623220 236 ntBASIC6.51□□□□□ -1.37
SOX1O00570 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX1O00570 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 AC024651.2-201ENST00000562480 2098 ntBASIC6.51□□□□□ -1.37
SOX1O00570 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.51□□□□□ -1.37
SOX1O00570 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.5□□□□□ -1.37
SOX1O00570 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.5□□□□□ -1.37
SOX1O00570 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.5□□□□□ -1.37
SOX1O00570 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 FAM32BP-201ENST00000344033 333 ntBASIC6.5□□□□□ -1.37
SOX1O00570 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 RNU6-462P-201ENST00000362659 105 ntBASIC6.5□□□□□ -1.37
SOX1O00570 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SOX1O00570 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SOX1O00570 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SOX1O00570 RPL5P5-201ENST00000392009 893 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AC013442.1-201ENST00000397347 228 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AL356776.1-201ENST00000406574 447 ntBASIC6.5□□□□□ -1.37
SOX1O00570 NACAP7-201ENST00000407371 609 ntBASIC6.5□□□□□ -1.37
SOX1O00570 RNU4-55P-201ENST00000410731 137 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX1O00570 METTL15P3-201ENST00000415522 1221 ntBASIC6.5□□□□□ -1.37
SOX1O00570 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.5□□□□□ -1.37
SOX1O00570 SLC35E1P1-201ENST00000419313 864 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX1O00570 RPL7L1P9-201ENST00000431298 745 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.5□□□□□ -1.37
SOX1O00570 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 MORF4-201ENST00000447135 971 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 RN7SL738P-201ENST00000470264 297 ntBASIC6.5□□□□□ -1.37
SOX1O00570 TRBV8-2-201ENST00000475637 270 ntBASIC6.5□□□□□ -1.37
SOX1O00570 RPL7P39-201ENST00000481157 744 ntBASIC6.5□□□□□ -1.37
SOX1O00570 RPS3AP14-201ENST00000483907 780 ntBASIC6.5□□□□□ -1.37
SOX1O00570 HMGB1P29-201ENST00000505659 499 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AC048346.1-201ENST00000510247 144 ntBASIC6.5□□□□□ -1.37
SOX1O00570 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 MTCO1P30-201ENST00000515244 580 ntBASIC6.5□□□□□ -1.37
SOX1O00570 RNU6-615P-201ENST00000516065 106 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX1O00570 IGLV3-30-201ENST00000524362 298 ntBASIC6.5□□□□□ -1.37
SOX1O00570 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX1O00570 AC022878.1-201ENST00000530684 149 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX1O00570 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX1O00570 POLR2KP1-201ENST00000553226 168 ntBASIC6.5□□□□□ -1.37
SOX1O00570 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX1O00570 SS18L2P2-201ENST00000583960 235 ntBASIC6.5□□□□□ -1.37
SOX1O00570 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.5□□□□□ -1.37
SOX1O00570 AC007363.1-201ENST00000604736 620 ntBASIC6.5□□□□□ -1.37
SOX1O00570 AP000942.4-201ENST00000604811 241 ntBASIC6.5□□□□□ -1.37
SOX1O00570 MLECP1-201ENST00000615893 709 ntBASIC6.5□□□□□ -1.37
SOX1O00570 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX1O00570 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 AC112487.2-201ENST00000637950 304 ntBASIC6.5□□□□□ -1.37
SOX1O00570 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SOX1O00570 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX1O00570 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SOX1O00570 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX1O00570 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms