Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 HIF1AP1-201ENST00000553642 175 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 RN7SL689P-201ENST00000577215 297 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AC017100.2-201ENST00000584628 355 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 GLYATL1P2-202ENST00000588046 902 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 FXYD6P1-201ENST00000604857 285 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AL161734.1-201ENST00000609720 557 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 Y_RNA.812-201ENST00000610788 101 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 Y_RNA.784-201ENST00000613803 101 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AC015712.7-201ENST00000615211 635 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 Y_RNA.787-201ENST00000616522 101 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 Y_RNA.780-201ENST00000617336 101 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 Y_RNA.801-201ENST00000619005 101 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 SAMMSON-227ENST00000642114 1199 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AC079753.1-201ENST00000623243 3868 ntBASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SHISA3A0PJX4 AL033543.1-201ENST00000623440 13454 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 HDAC1P2-201ENST00000453661 1398 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AL359955.1-201ENST00000455242 3275 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 CDC27P2-201ENST00000425026 1922 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 RNU6-845P-201ENST00000362578 103 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 RNA5SP514-201ENST00000363717 111 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 Y_RNA.166-201ENST00000363730 102 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AL590635.1-201ENST00000406314 586 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 RN7SKP117-201ENST00000410175 264 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 RANP6-201ENST00000413691 644 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AL359092.1-201ENST00000417156 265 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 EIF1P3-201ENST00000423841 334 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 OR52B5P-201ENST00000435337 951 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 RPS3AP54-201ENST00000435535 734 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 TUBB4BP6-201ENST00000437576 479 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 SEPT14P3-201ENST00000439401 183 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AL732372.2-207ENST00000445840 183 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 HMGN1P36-201ENST00000446623 298 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 SEPT14P2-201ENST00000453405 183 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 HMGN3P1-201ENST00000453847 193 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 RNU6-420P-201ENST00000458780 107 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 RPS20P20-201ENST00000460498 340 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 RPS26P6-201ENST00000475156 348 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 TECRP2-201ENST00000503270 928 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC010409.2-201ENST00000505780 478 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 SEPT14P4-201ENST00000513445 186 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC108471.1-201ENST00000513977 287 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 RNU6-445P-201ENST00000516949 107 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 FO082796.1-201ENST00000523795 183 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 HSPE1P3-201ENST00000559254 309 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC022432.1-201ENST00000595739 310 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC023206.1-201ENST00000605824 298 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 PTCHD3P1-201ENST00000612350 537 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms