Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC005377.1-201ENST00000605126 456 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AL583856.2-201ENST00000606298 543 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC023813.4-201ENST00000607580 580 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC133644.2-201ENST00000608142 540 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AC007671.2-201ENST00000637344 619 ntBASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CTDP1Q9Y5B0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AL133268.1-201ENST00000405676 1401 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC004076.2-201ENST00000620532 3323 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 DDX18P5-201ENST00000534547 1306 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC092638.1-201ENST00000411966 1275 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 BTF3P9-201ENST00000418784 283 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC016772.1-201ENST00000444170 1261 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 HMGB3P6-201ENST00000444896 598 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 MTND1P27-201ENST00000451117 902 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC079168.1-201ENST00000458741 345 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 MTCYBP16-201ENST00000509187 1129 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC021146.7-201ENST00000509604 775 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 RN7SKP260-201ENST00000516907 149 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 HMGB1P1-201ENST00000522557 636 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC011611.5-201ENST00000552477 578 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC007599.1-201ENST00000568688 1174 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 MTND4LP24-201ENST00000572277 291 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 BMS1P7-201ENST00000602440 1052 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 SUMO2P14-201ENST00000604488 293 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC019131.2-201ENST00000609071 870 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AL139124.1-201ENST00000609123 421 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC103706.2-201ENST00000638080 240 ntBASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.09□□□□□ -1.43
CTDP1Q9Y5B0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CTDP1Q9Y5B0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CTDP1Q9Y5B0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
CTDP1Q9Y5B0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
CTDP1Q9Y5B0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC092451.3-201ENST00000625067 1343 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 ANKRD36P1-201ENST00000344424 659 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 U3.10-201ENST00000364459 214 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AL356320.2-201ENST00000417263 507 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 TIMM9P2-201ENST00000419324 266 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC006466.1-201ENST00000438721 289 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 UBE2D3P4-201ENST00000441973 436 ntBASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.08□□□□□ -1.44
CTDP1Q9Y5B0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms