Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 OR6R2P-201ENST00000609216 300 ntBASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 MIR6862-1-201ENST00000613016 70 ntBASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 MIR6862-2-201ENST00000614755 70 ntBASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 AL158196.1-201ENST00000616786 434 ntBASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 CR392039.4-201ENST00000624968 501 ntBASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RCL1Q9Y2P8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC090229.1-201ENST00000590983 1609 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 SAGE2P-201ENST00000420011 2126 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 RN7SKP160-201ENST00000363804 340 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AL591848.1-201ENST00000413092 322 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AL445528.1-201ENST00000426330 420 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 MED6P1-201ENST00000439659 713 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 RPL34P26-201ENST00000445636 354 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 NDUFS5P3-201ENST00000450668 321 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 OR2AF1P-201ENST00000454899 889 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC079804.1-201ENST00000461922 436 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC092905.1-201ENST00000467527 949 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 SUMO1P1-201ENST00000497904 306 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 HMGB1P3-201ENST00000502802 616 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC010285.3-201ENST00000511668 676 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 MIR4458-201ENST00000578872 75 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 RN7SL753P-201ENST00000581238 290 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 FKBP1AP1-201ENST00000594588 318 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC093765.1-201ENST00000603758 881 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 FAM27B-201ENST00000610601 213 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 MIR6826-201ENST00000617808 98 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AL442639.1-201ENST00000625030 1899 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 NXPH1-205ENST00000602349 1953 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC007529.1-201ENST00000418574 2178 ntBASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCL1Q9Y2P8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 SNORA51.1-201ENST00000363243 140 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 RNA5SP132-201ENST00000364725 118 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 NPM1P4-201ENST00000414095 812 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 RPS23P10-201ENST00000416185 486 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC062016.2-201ENST00000420950 676 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC079355.1-201ENST00000421770 223 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 NANOGP6-201ENST00000429190 847 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 PRELID3BP10-201ENST00000431957 584 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 CEACAMP1-201ENST00000434624 1035 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 MTND2P8-201ENST00000450555 1025 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC010733.1-201ENST00000451515 401 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC083829.1-201ENST00000503756 657 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 PARP4P3-201ENST00000510265 317 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms