Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 OR52H1-202ENST00000641796 1061 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 RNA5SP28-201ENST00000363841 119 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AC009302.1-201ENST00000417147 390 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AC234779.1-201ENST00000425910 285 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 NPM1P26-201ENST00000426339 738 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AL357520.1-201ENST00000441557 453 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 RAB28P3-201ENST00000448325 597 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 RPL10P17-201ENST00000453852 316 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 HMGN1P8-201ENST00000463578 288 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 PRELID3BP5-201ENST00000508612 460 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 FAM60CP-201ENST00000591086 664 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AC006338.2-201ENST00000616864 791 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 AC015908.5-201ENST00000623289 343 ntBASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
CLIP2Q9UDT6 LINC00622-201ENST00000562811 1570 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 OR10AB1P-202ENST00000641219 1686 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 SNORA70.2-201ENST00000364506 135 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 ATP5F1P2-201ENST00000398143 760 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AL121834.1-202ENST00000404494 277 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AC053481.1-201ENST00000467217 306 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AC105918.1-201ENST00000474399 838 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 RPL23AP65-201ENST00000475608 468 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 RN7SL810P-201ENST00000493031 276 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AC106806.2-201ENST00000509365 500 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 RN7SKP122-201ENST00000515923 296 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 IGKV2D-10-201ENST00000520194 281 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 TRAV11-201ENST00000539512 339 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AC027455.1-201ENST00000574104 594 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 AC114781.5-201ENST00000615297 108 ntBASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP2Q9UDT6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 MIR365B-201ENST00000362317 111 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AL049693.1-201ENST00000402760 611 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 NCSTNP1-201ENST00000406229 144 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 RSL24D1P6-201ENST00000426934 401 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC011998.1-201ENST00000433403 117 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 RPS27AP17-201ENST00000463344 455 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC010618.1-201ENST00000469924 477 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC022336.1-201ENST00000475510 337 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC023575.1-201ENST00000580510 358 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 MIR3138-201ENST00000585238 82 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC009303.3-201ENST00000591103 736 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC009237.17-201ENST00000618111 748 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC006065.6-201ENST00000625201 545 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms