Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 CASC19-221ENST00000641309 1382 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 RNA5SP123-201ENST00000363244 119 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 RNU5B-4P-201ENST00000363508 111 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 RNA5SP90-201ENST00000364801 99 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC234772.1-201ENST00000377927 937 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 RNU6-225P-201ENST00000384613 103 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 U3.32-201ENST00000408116 212 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 OR51B3P-201ENST00000412287 913 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 COX6B1P1-201ENST00000415962 213 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC013429.2-201ENST00000418798 781 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC012519.1-201ENST00000424588 610 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC104837.2-201ENST00000427236 424 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC093422.3-201ENST00000428506 305 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 COX6CP13-201ENST00000428703 226 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 USP9YP9-201ENST00000429406 715 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 MTND2P5-201ENST00000432656 1006 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 FABP5P3-201ENST00000437960 408 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AP000936.3-201ENST00000438127 255 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 PRPF38AP2-201ENST00000438179 851 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 Z77249.1-201ENST00000444622 1175 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 EIF2S2P2-201ENST00000447161 982 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 TRY2P-201ENST00000448860 689 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AL096803.2-201ENST00000450032 677 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 RN7SL244P-201ENST00000493405 297 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC111193.1-201ENST00000504097 155 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC108471.1-201ENST00000513977 287 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC091163.3-201ENST00000518269 1144 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC023538.1-201ENST00000534576 736 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 OR8K4P-201ENST00000534608 872 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 BNIP3P1-201ENST00000547295 580 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC010735.1-201ENST00000567305 1026 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC234772.3-201ENST00000602277 528 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AL669942.2-201ENST00000620352 697 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC022079.1-201ENST00000621546 602 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC006927.2-201ENST00000639256 389 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 AC007996.1-201ENST00000620414 2821 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 STX3-208ENST00000641815 3236 ntBASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.08□□□□□ -1.6
NCKIPSDQ9NZQ3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 VN2R3P-201ENST00000422626 1412 ntBASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 GTF2H2B-203ENST00000508065 1432 ntBASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 SNORA51.8-201ENST00000384234 132 ntBASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 ZNF602P-201ENST00000405929 924 ntBASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 MIR1271-201ENST00000408537 86 ntBASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 VTA1P1-201ENST00000414044 866 ntBASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 GJA6P-201ENST00000415117 1042 ntBASIC5.07□□□□□ -1.6
NCKIPSDQ9NZQ3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms