Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC084783.1-201ENST00000565846 910 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AL096803.3-201ENST00000609032 532 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 uc_338.9-201ENST00000617424 182 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC068831.8-201ENST00000620171 435 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC004232.3-201ENST00000622977 525 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 RPL23AP61-201ENST00000623642 466 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AL133268.1-201ENST00000405676 1401 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 CASC19-206ENST00000641028 1430 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 MAPK10-320ENST00000641462 6696 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 CASKP1-201ENST00000412870 582 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AL450992.3-201ENST00000413192 568 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 GAPDHP49-201ENST00000421421 961 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AL138785.1-201ENST00000425821 331 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC023141.6-201ENST00000429418 337 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 H2AFZP5-201ENST00000446960 382 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC108751.2-201ENST00000469993 231 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC010683.1-201ENST00000473673 378 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC025674.1-201ENST00000507074 324 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC134698.5-201ENST00000519444 336 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC105129.1-201ENST00000560250 297 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC093249.4-201ENST00000564755 259 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 RN7SL176P-201ENST00000580352 264 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 MIR4512-201ENST00000583257 77 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 KPNA2P3-201ENST00000584190 848 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 AC008782.1-201ENST00000603386 430 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 OR7A19P-201ENST00000608051 733 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 CFTRP2-201ENST00000634304 199 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 MIR6715B-201ENST00000637172 77 ntBASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
TM9SF3Q9HD45 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC022893.2-201ENST00000564832 3296 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC009643.2-201ENST00000603543 1448 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 IL6STP1-201ENST00000346911 1020 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 RN7SKP227-201ENST00000364445 330 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 SNORA71.2-201ENST00000364941 134 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 RNA5SP498-201ENST00000411342 120 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 GSTM3P2-201ENST00000412746 530 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 E2F6P2-201ENST00000420708 748 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 EIF4HP2-201ENST00000424380 563 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 HMGB3P21-201ENST00000452483 547 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC005229.2-201ENST00000456995 399 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 MTND4LP2-201ENST00000502312 285 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms