Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AL049697.2-201ENST00000403708 294 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AL078604.1-201ENST00000404609 466 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC009965.2-201ENST00000425328 970 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 CENPIP1-201ENST00000425713 902 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 DPY19L1P2-201ENST00000426647 915 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AL360081.1-201ENST00000428299 555 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC073069.1-201ENST00000428657 441 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AL359265.2-201ENST00000434367 631 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 Z99127.2-201ENST00000441426 334 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC010326.1-201ENST00000462726 602 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 RPL12P20-201ENST00000475538 479 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC105233.1-201ENST00000498840 781 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 STMN1P2-201ENST00000508435 439 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC100770.1-201ENST00000532310 322 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC084757.1-201ENST00000559987 490 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 HNRNPCP4-201ENST00000571636 900 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 MIR4270-201ENST00000581799 70 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AL021707.7-201ENST00000607991 416 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AL049539.1-201ENST00000611964 459 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC139769.3-201ENST00000618383 175 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AC091953.3-201ENST00000623220 236 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 AP006248.2-201ENST00000623309 592 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 LINC01808-202ENST00000641680 1116 ntBASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRRC40Q9H9A6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 MFSD8-242ENST00000641690 4199 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 ATP5F1P2-201ENST00000398143 760 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 RNA5SP498-201ENST00000411342 120 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 AC004690.1-201ENST00000418216 328 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 UBTFL3-201ENST00000418934 1024 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 CDY14P-201ENST00000431260 1014 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 AL049745.1-201ENST00000433953 286 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 CDY12P-201ENST00000440679 1015 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 CDY13P-201ENST00000445813 1015 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 AL162591.2-201ENST00000449634 317 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 CDY23P-201ENST00000451661 1014 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 DDX39BP2-208ENST00000453923 258 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 UBTFL6-201ENST00000477929 1024 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 RNA5SP497-201ENST00000516081 97 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 MIR4716-201ENST00000579628 84 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 AP004372.1-201ENST00000604842 844 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 AC055839.1-201ENST00000634467 498 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 OR5AC4P-202ENST00000642086 985 ntBASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRRC40Q9H9A6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 RNA5SP307-201ENST00000362863 116 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 RNA5SP28-201ENST00000363841 119 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 RN7SKP167-201ENST00000411047 285 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 SNORA74C-2-201ENST00000411179 201 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms