Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC139365.2-201ENST00000517972 253 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 NDUFA5P2-201ENST00000519723 344 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 OR8I1P-201ENST00000529291 931 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC004217.3-201ENST00000551552 878 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS11Q9H270 RPA2P1-201ENST00000556557 721 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS11Q9H270 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC015688.2-201ENST00000584523 262 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC011500.1-201ENST00000601963 469 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.67□□□□□ -1.5
VPS11Q9H270 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS11Q9H270 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VPS11Q9H270 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS11Q9H270 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC010329.2-201ENST00000595195 2737 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VPS11Q9H270 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 SAMMSON-213ENST00000641336 1521 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS11Q9H270 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS11Q9H270 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS11Q9H270 Y_RNA.11-201ENST00000362375 109 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 RNU6-236P-201ENST00000363886 106 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 RNU1-146P-201ENST00000364015 165 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 RPL7P27-201ENST00000403775 720 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC245052.5-201ENST00000416320 649 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 CBX1P4-201ENST00000439415 457 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 ATP5LP2-201ENST00000440646 311 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AC243772.1-201ENST00000451620 410 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC005229.2-201ENST00000456995 399 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 RPL7AP10-201ENST00000481016 791 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 CBX3P3-201ENST00000508108 532 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AC011411.1-201ENST00000509592 876 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 IGLVIV-64-201ENST00000518581 301 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AL121766.1-201ENST00000547436 487 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AL359219.2-201ENST00000555184 348 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC121758.1-202ENST00000556917 658 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AC096996.1-201ENST00000563813 325 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC002519.2-203ENST00000567043 837 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS11Q9H270 MIR4502-201ENST00000580432 81 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AP005262.1-201ENST00000582646 997 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC124916.2-201ENST00000604416 224 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC007684.1-201ENST00000609671 477 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC092266.1-201ENST00000610958 165 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AL138478.1-201ENST00000612252 832 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AC245014.3-201ENST00000618589 347 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AF246928.1-201ENST00000623768 87 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 AC015726.3-201ENST00000624501 418 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS11Q9H270 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS11Q9H270 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms