Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AP005019.3-201ENST00000620418 560 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AC002044.3-201ENST00000623314 541 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AC010329.2-201ENST00000595195 2737 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AL592182.3-201ENST00000642132 3304 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 MFSD8-242ENST00000641690 4199 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 CNOT7P1-201ENST00000429006 852 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC099063.2-201ENST00000446360 662 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 TPT1P13-201ENST00000449760 499 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 CYCSP42-201ENST00000450823 238 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC006463.2-201ENST00000473326 348 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 RN7SL459P-201ENST00000481078 302 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 TRAV11-201ENST00000539512 339 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC022387.2-201ENST00000604050 448 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC145207.9-201ENST00000623802 325 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 AC017104.4-201ENST00000636283 1592 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.95□□□□□ -1.62
CCSER1Q9C0I3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC008033.1-201ENST00000216407 1162 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 RNU6-225P-201ENST00000384613 103 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 RNU6-178P-201ENST00000384631 104 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 RPL23AP59-201ENST00000399415 461 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 VN1R8P-201ENST00000407739 893 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 ELOCP19-201ENST00000411919 318 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 TMSB10P2-201ENST00000416049 131 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 CASP3P1-201ENST00000446037 609 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AL354710.1-201ENST00000453641 246 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 EIF2S2P4-201ENST00000461070 984 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC015795.1-201ENST00000513669 327 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 HMGB1P19-201ENST00000517578 577 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 NPM1P35-201ENST00000533043 868 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC021483.2-201ENST00000567415 758 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 MIR7154-201ENST00000620673 73 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 AC015908.5-201ENST00000623289 343 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 DDX18P3-201ENST00000404856 2007 ntBASIC4.94□□□□□ -1.62
CCSER1Q9C0I3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.93□□□□□ -1.62
CCSER1Q9C0I3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCSER1Q9C0I3 AC007342.9-201ENST00000623877 1385 ntBASIC4.93□□□□□ -1.62
CCSER1Q9C0I3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCSER1Q9C0I3 MTCO1P8-201ENST00000416914 1523 ntBASIC4.93□□□□□ -1.62
CCSER1Q9C0I3 BX005019.1-201ENST00000561881 1810 ntBASIC4.93□□□□□ -1.62
CCSER1Q9C0I3 AC092079.1-201ENST00000558620 1985 ntBASIC4.93□□□□□ -1.62
CCSER1Q9C0I3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms