Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC007115.1-201ENST00000546853 234 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 ISCA1P3-201ENST00000577104 373 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC010487.1-201ENST00000594408 1172 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 VN1R88P-201ENST00000596787 292 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC068790.6-201ENST00000602558 258 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 LSM1P2-201ENST00000604911 322 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC090525.3-201ENST00000605601 189 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC068792.1-201ENST00000621354 417 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AF246928.1-201ENST00000623768 87 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC007494.3-201ENST00000624660 743 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 CDC27P2-201ENST00000425026 1922 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC005539.1-201ENST00000443768 1479 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-1200P-201ENST00000384162 107 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 SNORD56.6-201ENST00000384569 71 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 SNORA11C-201ENST00000408532 129 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 OR3A2-201ENST00000408891 1076 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 Y_RNA.599-201ENST00000410489 109 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 RN7SKP59-201ENST00000410520 314 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC211486.3-201ENST00000412694 621 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC245060.4-201ENST00000413293 1121 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 DPPA2P2-201ENST00000418220 897 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AL121878.1-201ENST00000418638 859 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC007161.1-204ENST00000423039 460 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC129850.1-201ENST00000436203 508 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 NPM1P33-201ENST00000438918 872 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 RPL30P6-201ENST00000475925 342 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 GAPDHP39-201ENST00000481866 979 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 IGBP1P4-201ENST00000503202 879 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-416P-201ENST00000516265 103 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC105185.1-201ENST00000518705 535 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 RPL12P22-201ENST00000519073 490 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AP001094.1-201ENST00000579805 193 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AL031985.2-201ENST00000600955 480 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC069545.1-201ENST00000605671 358 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AL353600.1-201ENST00000608148 251 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC097505.1-201ENST00000610199 565 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC073114.1-201ENST00000612027 490 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC006840.1-201ENST00000623069 542 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AL360270.2-201ENST00000562952 5985 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 MTND4P4-201ENST00000439033 1366 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AL390237.1-201ENST00000404226 1415 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 AC106872.5-201ENST00000508856 1416 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 CR381670.1-201ENST00000624291 1693 ntBASIC5.12□□□□□ -1.59
AMBRA1Q9C0C7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms