Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 TCEAL4P1-201ENST00000453620 588 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 MRPS21P1-201ENST00000453850 223 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC004692.1-201ENST00000455430 424 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 HMGN2P26-201ENST00000463169 339 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 RPS4XP23-201ENST00000487801 237 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC008040.4-201ENST00000494834 768 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC097263.1-201ENST00000496795 606 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 RN7SKP116-201ENST00000516902 319 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AP005597.4-201ENST00000526762 229 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AP000907.2-201ENST00000530827 353 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 OR7E87P-201ENST00000532397 929 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 CYCSP1-201ENST00000604815 315 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AL513218.1-201ENST00000606527 391 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 U47924.1-201ENST00000606539 434 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AP001437.1-201ENST00000608783 456 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 RN7SL680P-201ENST00000620379 299 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC009318.4-201ENST00000620496 486 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC015871.5-202ENST00000623252 701 ntBASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.65□□□□□ -1.34
DEPDC4Q8N2C3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
DEPDC4Q8N2C3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC097461.1-201ENST00000568928 2821 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC110597.1-201ENST00000562669 3176 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RNY4P16-201ENST00000364768 94 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RN7SKP6-201ENST00000364795 319 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RNU1-16P-201ENST00000365477 164 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 SNORA32.2-201ENST00000384049 122 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RNU6-1148P-201ENST00000410992 104 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RPS15AP12-201ENST00000419498 388 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AL645937.1-202ENST00000421799 937 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RPL36P19-201ENST00000430744 301 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AL356276.2-201ENST00000435919 558 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RNU6-329P-201ENST00000459618 107 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 GMFBP1-201ENST00000467831 427 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC084878.1-201ENST00000480555 648 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RPL7P42-201ENST00000481005 679 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AK3P4-201ENST00000504283 583 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC106774.2-201ENST00000510266 406 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC095059.2-201ENST00000510601 933 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC105417.1-201ENST00000514691 285 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 SCARNA24.1-201ENST00000516465 137 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AP003080.1-202ENST00000526526 915 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 HNRNPCP8-201ENST00000528764 888 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC018523.1-201ENST00000534211 512 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 MIR4675-201ENST00000577898 77 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC015801.1-201ENST00000585651 153 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms