Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC096553.1-201ENST00000605169 829 ntBASIC5.72□□□□□ -1.49
XRN1Q8IZH2 AC138965.3-201ENST00000623875 498 ntBASIC5.72□□□□□ -1.49
XRN1Q8IZH2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
XRN1Q8IZH2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
XRN1Q8IZH2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
XRN1Q8IZH2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
XRN1Q8IZH2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRN1Q8IZH2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
XRN1Q8IZH2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRN1Q8IZH2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRN1Q8IZH2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRN1Q8IZH2 AC021242.1-201ENST00000507315 2035 ntBASIC5.71□□□□□ -1.49
XRN1Q8IZH2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 RPL21P17-201ENST00000397467 475 ntBASIC5.71□□□□□ -1.49
XRN1Q8IZH2 PEX12P1-201ENST00000400284 1048 ntBASIC5.71□□□□□ -1.49
XRN1Q8IZH2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.71□□□□□ -1.49
XRN1Q8IZH2 FCF1P7-201ENST00000451185 558 ntBASIC5.71□□□□□ -1.49
XRN1Q8IZH2 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.71□□□□□ -1.49
XRN1Q8IZH2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 AC008966.2-201ENST00000606157 453 ntBASIC5.71□□□□□ -1.49
XRN1Q8IZH2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
XRN1Q8IZH2 AP000641.1-201ENST00000531988 1639 ntBASIC5.71□□□□□ -1.49
XRN1Q8IZH2 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 AC032011.1-201ENST00000611703 1549 ntBASIC5.71□□□□□ -1.5
XRN1Q8IZH2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 AC138938.1-201ENST00000515431 782 ntBASIC5.71□□□□□ -1.5
XRN1Q8IZH2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.71□□□□□ -1.5
XRN1Q8IZH2 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 AL133268.1-201ENST00000405676 1401 ntBASIC5.7□□□□□ -1.5
XRN1Q8IZH2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 RNA5SP399-201ENST00000364003 117 ntBASIC5.7□□□□□ -1.5
XRN1Q8IZH2 MIR491-201ENST00000384877 84 ntBASIC5.7□□□□□ -1.5
XRN1Q8IZH2 AC233289.1-201ENST00000403700 508 ntBASIC5.7□□□□□ -1.5
XRN1Q8IZH2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 AC007967.1-201ENST00000455422 1159 ntBASIC5.7□□□□□ -1.5
XRN1Q8IZH2 RPS26P28-201ENST00000470806 348 ntBASIC5.7□□□□□ -1.5
XRN1Q8IZH2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 Z82217.1-201ENST00000625157 8149 ntBASIC5.7□□□□□ -1.5
XRN1Q8IZH2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.7□□□□□ -1.5
XRN1Q8IZH2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 SNORA60-201ENST00000362396 134 ntBASIC5.69□□□□□ -1.5
XRN1Q8IZH2 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 U1.1-201ENST00000384101 164 ntBASIC5.69□□□□□ -1.5
XRN1Q8IZH2 SNORD96B-201ENST00000386148 79 ntBASIC5.69□□□□□ -1.5
XRN1Q8IZH2 SNORD66.1-201ENST00000391230 76 ntBASIC5.69□□□□□ -1.5
XRN1Q8IZH2 AC018635.1-201ENST00000468292 1030 ntBASIC5.69□□□□□ -1.5
XRN1Q8IZH2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 RNU1-95P-201ENST00000516357 160 ntBASIC5.69□□□□□ -1.5
XRN1Q8IZH2 RNU1-128P-201ENST00000516704 160 ntBASIC5.69□□□□□ -1.5
XRN1Q8IZH2 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 AL121834.1-201ENST00000572284 509 ntBASIC5.69□□□□□ -1.5
XRN1Q8IZH2 AC005412.1-201ENST00000580812 1049 ntBASIC5.69□□□□□ -1.5
XRN1Q8IZH2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
XRN1Q8IZH2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms