Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RN7SKP232-201ENST00000410170 290 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 MRPS18CP6-201ENST00000423587 223 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 PPIAP32-201ENST00000449940 472 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 SUMO2P10-201ENST00000452006 288 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 RN7SL251P-201ENST00000464175 297 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AL049714.1-201ENST00000466686 347 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 RN7SL267P-201ENST00000485107 261 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AC108120.1-201ENST00000506543 991 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 RNA5SP337-201ENST00000517007 109 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AC084337.1-201ENST00000524809 686 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AP003084.1-201ENST00000524828 742 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AP003733.2-201ENST00000529409 171 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 MDM2-233ENST00000545204 398 ntTSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 AC138749.2-201ENST00000566048 167 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 AL138726.1-201ENST00000614873 333 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 MAPK10-347ENST00000641762 2856 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 UGT2B27P-201ENST00000505092 1620 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC023421.1-201ENST00000590535 1785 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 OR5M2P-202ENST00000641241 4242 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 Y_RNA.8-201ENST00000362353 102 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 RNU6-452P-201ENST00000384406 107 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 RNU2-29P-201ENST00000410423 189 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 RAC1P4-201ENST00000419413 579 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 E2F6P2-201ENST00000420708 748 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 FAM183DP-201ENST00000421987 399 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC093655.2-201ENST00000425735 631 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC010154.1-201ENST00000425857 269 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 LINC00328-2P-201ENST00000436585 219 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC123904.1-201ENST00000441072 368 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 PTMAP1-205ENST00000455552 325 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 RPS29P15-201ENST00000458329 171 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC108860.1-201ENST00000484521 383 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC025271.1-201ENST00000485045 429 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC073610.1-201ENST00000489971 396 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC093852.1-201ENST00000503587 266 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC024451.1-201ENST00000508013 779 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 RNA5SP287-201ENST00000516358 103 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 SNORA40.14-201ENST00000516543 86 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC006116.1-201ENST00000587908 2171 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 COX6CP16-201ENST00000603667 216 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms