Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 ZNF876P-202ENST00000398732 1485 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AL078595.1-201ENST00000404458 226 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 MIR1303-201ENST00000408625 86 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AL356320.2-201ENST00000417263 507 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 USP9YP9-201ENST00000429406 715 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 UBE2V1P1-201ENST00000430836 445 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 RPL12P17-201ENST00000432393 498 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 USP9YP28-201ENST00000435142 589 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 PTENP1-201ENST00000447117 1215 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AL133244.1-201ENST00000456007 258 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 Z92846.1-201ENST00000456203 268 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 USP9YP25-201ENST00000457708 443 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 PSAT1P4-201ENST00000466500 526 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 RN7SL738P-201ENST00000470264 297 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 RN7SL591P-201ENST00000496150 292 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC111193.1-201ENST00000504097 155 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC104108.1-201ENST00000509930 412 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 RNA5SP373-201ENST00000517271 95 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 MTCO3P15-201ENST00000526563 574 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AP004607.2-201ENST00000533949 322 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 MIR3936-201ENST00000584304 110 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AL020997.3-201ENST00000602843 359 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC069304.3-201ENST00000603938 1084 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AL139344.1-201ENST00000605228 195 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC122108.2-201ENST00000611946 526 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 VN1R74P-201ENST00000613259 503 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AL122125.1-201ENST00000616999 600 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 VN1R7P-201ENST00000619242 903 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC091304.6-201ENST00000619761 202 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC078883.4-201ENST00000623218 367 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC091905.4-201ENST00000623432 202 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AL512506.2-201ENST00000624472 458 ntBASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A4Q53GD3 CASC19-284ENST00000642142 1868 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 RNU1-87P-201ENST00000363727 170 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 ATP5F1P2-201ENST00000398143 760 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 RAB28P1-201ENST00000411517 641 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC027644.1-201ENST00000419595 298 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 RNGTTP1-201ENST00000420965 728 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC245028.1-201ENST00000423259 256 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 BX119904.4-201ENST00000424402 301 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 FTLP19-201ENST00000433300 394 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC084290.1-201ENST00000434995 374 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 MTND4P32-201ENST00000437189 1237 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AP000936.3-201ENST00000438127 255 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AL929288.2-201ENST00000446368 407 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC092647.2-201ENST00000452998 253 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 RPL23AP37-201ENST00000479658 549 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 snoZ278.1-201ENST00000517059 112 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 HMGB1P23-201ENST00000518743 568 ntBASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A4Q53GD3 AP002373.2-201ENST00000541631 1060 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms