Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 CYCSP12-201ENST00000437729 300 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 EIF4A1P11-201ENST00000451239 222 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 RPS6P2-201ENST00000454208 705 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC023141.9-201ENST00000458734 412 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC074386.1-201ENST00000476560 767 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC006427.1-201ENST00000514359 712 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 RNA5SP373-201ENST00000517271 95 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 SMARCE1P4-201ENST00000523647 241 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 OR10V3P-201ENST00000525712 725 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC024940.3-201ENST00000538551 316 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 AL442163.2-201ENST00000553912 710 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC008814.1-201ENST00000603797 406 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AL589674.2-201ENST00000604304 337 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 AL353600.1-201ENST00000608148 251 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC015914.2-201ENST00000618167 288 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC015804.1-201ENST00000622935 435 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AP000648.2-201ENST00000624182 404 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC38Q502W7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC38Q502W7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 RN7SKP229-201ENST00000410465 302 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 AL390774.1-201ENST00000411924 246 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 MTATP6P20-201ENST00000414147 562 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AL590609.2-201ENST00000421430 368 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AL161722.2-201ENST00000434731 981 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 PRDX3P4-201ENST00000470828 747 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AC015724.1-201ENST00000478577 156 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 RPL7L1P4-201ENST00000513004 707 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 TCP11X3P-202ENST00000514289 1254 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 RNA5SP362-201ENST00000516048 118 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 RNU6-941P-201ENST00000516346 108 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 MTCO3P15-201ENST00000526563 574 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AC018695.5-201ENST00000605872 315 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 AC007204.2-201ENST00000615022 616 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 BX005214.3-202ENST00000619809 325 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 OR51H2P-202ENST00000641424 3046 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.32□□□□□ -1.56
CCDC38Q502W7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms