Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 Y_RNA.787-201ENST00000616522 101 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 Y_RNA.780-201ENST00000617336 101 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 Y_RNA.801-201ENST00000619005 101 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH1Q08174 DOCK11P1-201ENST00000553480 5932 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 AC007159.1-201ENST00000566529 4706 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
PCDH1Q08174 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 AC006210.2-201ENST00000367074 1545 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
PCDH1Q08174 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDH1Q08174 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PCDH1Q08174 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PCDH1Q08174 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PCDH1Q08174 RNA5SP514-201ENST00000363717 111 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 RNU6-777P-201ENST00000364265 104 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 U3.52-201ENST00000384034 216 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 SNORD115.1-201ENST00000391109 76 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 MIR1305-201ENST00000408300 86 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AL354751.2-201ENST00000415471 210 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDH1Q08174 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDH1Q08174 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH1Q08174 AC083862.1-201ENST00000427378 1242 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AL035410.1-201ENST00000427409 427 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 RPS27AP6-201ENST00000427962 448 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AC005534.2-201ENST00000431047 433 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 KCTD9P3-201ENST00000434597 1169 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH1Q08174 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 OR52E7P-201ENST00000452394 933 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 BTF3P5-201ENST00000457252 467 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AC093870.1-201ENST00000506837 213 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH1Q08174 IGKV1D-22-201ENST00000518953 324 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 HSPA8P13-201ENST00000523715 472 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDH1Q08174 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDH1Q08174 AL157394.1-201ENST00000562983 1224 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDH1Q08174 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH1Q08174 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH1Q08174 AC010928.3-201ENST00000587712 541 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH1Q08174 TPMTP1-201ENST00000592307 737 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDH1Q08174 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDH1Q08174 CKS1BP3-201ENST00000600888 237 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 BCRP9-201ENST00000605312 388 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AC019257.2-201ENST00000605539 497 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDH1Q08174 AC090948.2-201ENST00000607363 564 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AC006504.8-201ENST00000621046 635 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AL132640.3-201ENST00000630473 177 ntBASIC6.25□□□□□ -1.41
PCDH1Q08174 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDH1Q08174 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
PCDH1Q08174 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PCDH1Q08174 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
PCDH1Q08174 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDH1Q08174 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH1Q08174 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH1Q08174 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH1Q08174 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH1Q08174 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
PCDH1Q08174 CASC19-221ENST00000641309 1382 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH1Q08174 GNG5P1-201ENST00000255500 204 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDH1Q08174 RNU6-251P-201ENST00000363235 104 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AC092634.1-201ENST00000366505 199 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDH1Q08174 RNU6-769P-201ENST00000384407 104 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AP003170.5-201ENST00000397185 335 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms