Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC008885.2-201ENST00000509506 930 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC005351.1-201ENST00000511152 786 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.43□□□□□ -1.7
SCN1BQ07699 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.43□□□□□ -1.7
SCN1BQ07699 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SCN1BQ07699 ATP5J2P6-201ENST00000565203 266 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC091488.1-201ENST00000604239 660 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 BNIP3P35-201ENST00000604530 490 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC234782.5-201ENST00000617723 324 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AC078880.5-201ENST00000617845 421 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AC005840.5-201ENST00000619166 599 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 AC067852.7-201ENST00000623270 535 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SCN1BQ07699 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC022893.2-201ENST00000564832 3296 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 DDX18P5-201ENST00000534547 1306 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.43□□□□□ -1.7
SCN1BQ07699 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
SCN1BQ07699 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.43□□□□□ -1.7
SCN1BQ07699 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SCN1BQ07699 AC073055.1-201ENST00000456901 1621 ntBASIC4.43□□□□□ -1.7
SCN1BQ07699 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AC087190.4-201ENST00000574616 8334 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
SCN1BQ07699 RNU1-149P-201ENST00000390870 161 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 RPS24P12-201ENST00000402084 394 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SCN1BQ07699 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AL513325.1-201ENST00000417716 1034 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 OR2X1P-201ENST00000421144 687 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AC004448.2-201ENST00000422360 586 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 RPS27P18-201ENST00000431701 247 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 RPS29P10-201ENST00000439197 166 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 BX248409.1-201ENST00000455497 255 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.42□□□□□ -1.7
SCN1BQ07699 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AC092902.1-201ENST00000486999 259 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 RN7SL466P-201ENST00000497546 295 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AC010374.1-201ENST00000503762 1237 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN1BQ07699 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 RN7SKP96-201ENST00000516948 297 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 HMGB1P1-201ENST00000522557 636 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.42□□□□□ -1.7
SCN1BQ07699 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 RPL10P14-201ENST00000565265 298 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 MIR4789-201ENST00000577469 82 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 MIR3614-201ENST00000581261 86 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AP001180.3-201ENST00000582221 145 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 SUGT1P3-202ENST00000604259 383 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AC026979.4-201ENST00000606555 645 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AC004477.3-201ENST00000614061 590 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 AC106730.3-201ENST00000624568 641 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 AP000720.1-201ENST00000625091 483 ntBASIC4.42□□□□□ -1.7
SCN1BQ07699 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
SCN1BQ07699 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
SCN1BQ07699 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SCN1BQ07699 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN1BQ07699 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCN1BQ07699 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms