Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 REREP1Y-201ENST00000422655 198 ntBASIC4.68□□□□□ -1.66
LTBQ06643 RPS4XP16-201ENST00000427198 791 ntBASIC4.68□□□□□ -1.66
LTBQ06643 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.68□□□□□ -1.66
LTBQ06643 AC009238.2-201ENST00000431026 355 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AC084290.1-201ENST00000434995 374 ntBASIC4.68□□□□□ -1.66
LTBQ06643 PRPF38AP2-201ENST00000438179 851 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBQ06643 REREP2Y-201ENST00000439103 200 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AC073052.1-201ENST00000440417 714 ntBASIC4.68□□□□□ -1.66
LTBQ06643 RPL7AP61-201ENST00000443410 636 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.68□□□□□ -1.66
LTBQ06643 MTND1P29-201ENST00000448112 647 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBQ06643 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LTBQ06643 RPS4XP6-201ENST00000477670 797 ntBASIC4.68□□□□□ -1.66
LTBQ06643 RN7SL459P-201ENST00000481078 302 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBQ06643 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBQ06643 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 AC026782.2-201ENST00000510845 636 ntBASIC4.68□□□□□ -1.66
LTBQ06643 RNU6-1028P-201ENST00000517164 93 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 AC012400.1-201ENST00000518452 381 ntBASIC4.68□□□□□ -1.66
LTBQ06643 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBQ06643 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBQ06643 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.68□□□□□ -1.66
LTBQ06643 AP003033.1-201ENST00000527244 415 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBQ06643 AC063949.1-201ENST00000552900 865 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LTBQ06643 AC109446.2-201ENST00000567872 497 ntBASIC4.68□□□□□ -1.66
LTBQ06643 MIR1254-2-201ENST00000579553 63 ntBASIC4.68□□□□□ -1.66
LTBQ06643 MIR4472-2-201ENST00000582069 67 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBQ06643 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.68□□□□□ -1.66
LTBQ06643 AC015722.2-201ENST00000622210 551 ntBASIC4.68□□□□□ -1.66
LTBQ06643 AP002782.1-201ENST00000623107 614 ntBASIC4.68□□□□□ -1.66
LTBQ06643 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
LTBQ06643 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LTBQ06643 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LTBQ06643 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LTBQ06643 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LTBQ06643 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LTBQ06643 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LTBQ06643 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
LTBQ06643 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 AL022393.1-201ENST00000625142 1677 ntBASIC4.67□□□□□ -1.66
LTBQ06643 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LTBQ06643 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.67□□□□□ -1.66
LTBQ06643 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LTBQ06643 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.67□□□□□ -1.66
LTBQ06643 RNA5SP223-201ENST00000365174 120 ntBASIC4.67□□□□□ -1.66
LTBQ06643 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 RNU6-636P-201ENST00000384598 107 ntBASIC4.67□□□□□ -1.66
LTBQ06643 RNU2-17P-201ENST00000410290 190 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.67□□□□□ -1.66
LTBQ06643 XKRYP4-201ENST00000414395 483 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.67□□□□□ -1.66
LTBQ06643 HMGB1P49-201ENST00000418882 569 ntBASIC4.67□□□□□ -1.66
LTBQ06643 RPS3AP37-201ENST00000419176 745 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC234781.4-201ENST00000419384 244 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AL513175.2-201ENST00000422071 443 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.67□□□□□ -1.66
LTBQ06643 PNRC2P1-201ENST00000423940 420 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC108075.1-201ENST00000424692 529 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC093655.2-201ENST00000425735 631 ntBASIC4.67□□□□□ -1.66
LTBQ06643 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.67□□□□□ -1.66
LTBQ06643 RPS29P10-201ENST00000439197 166 ntBASIC4.67□□□□□ -1.66
LTBQ06643 CYCSP24-201ENST00000445119 316 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.67□□□□□ -1.66
LTBQ06643 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.67□□□□□ -1.66
LTBQ06643 XKRYP5-201ENST00000449659 483 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AL096803.2-201ENST00000450032 677 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC026414.1-201ENST00000504046 698 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.67□□□□□ -1.66
LTBQ06643 AC013701.1-201ENST00000522657 465 ntBASIC4.67□□□□□ -1.66
LTBQ06643 OR8I1P-201ENST00000529291 931 ntBASIC4.67□□□□□ -1.66
LTBQ06643 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 AL110118.1-201ENST00000553543 400 ntBASIC4.67□□□□□ -1.66
LTBQ06643 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms