Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.09□□□□□ -1.6
CCNA1P78396 ASNSP1-201ENST00000518311 1939 ntBASIC5.09□□□□□ -1.6
CCNA1P78396 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CCNA1P78396 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCNA1P78396 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCNA1P78396 AL158163.1-201ENST00000603915 1649 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCNA1P78396 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCNA1P78396 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCNA1P78396 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.08□□□□□ -1.6
CCNA1P78396 LARP1BP1-201ENST00000506036 1359 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNA1P78396 AC092079.1-201ENST00000558620 1985 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCNA1P78396 PPIAP31-201ENST00000405422 495 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 CTSL3P-202ENST00000412179 788 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 CASKP1-201ENST00000412870 582 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNA1P78396 AC073136.2-201ENST00000417282 849 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 RPL36AP36-201ENST00000418616 301 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNA1P78396 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNA1P78396 EIF4A1P11-201ENST00000451239 222 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 CLIC4P1-201ENST00000453177 535 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCNA1P78396 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.08□□□□□ -1.6
CCNA1P78396 TRAV8-5-201ENST00000537369 341 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 AC011270.1-201ENST00000558606 583 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNA1P78396 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.08□□□□□ -1.6
CCNA1P78396 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNA1P78396 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.08□□□□□ -1.6
CCNA1P78396 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNA1P78396 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCNA1P78396 AC023762.1-201ENST00000603280 584 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 GMCL1P2-201ENST00000605230 823 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 AC025175.1-201ENST00000606482 759 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 AL356274.1-201ENST00000617064 410 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.08□□□□□ -1.6
CCNA1P78396 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.08□□□□□ -1.6
CCNA1P78396 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNA1P78396 IQCB2P-201ENST00000401788 1633 ntBASIC5.08□□□□□ -1.6
CCNA1P78396 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNA1P78396 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CCNA1P78396 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNA1P78396 AC007342.7-201ENST00000624610 2337 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.07□□□□□ -1.6
CCNA1P78396 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCNA1P78396 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.07□□□□□ -1.6
CCNA1P78396 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCNA1P78396 MIR365B-201ENST00000362317 111 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 RN7SKP280-201ENST00000364196 304 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCNA1P78396 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNA1P78396 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.07□□□□□ -1.6
CCNA1P78396 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 COX6CP15-201ENST00000426313 211 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNA1P78396 NMNAT1P2-201ENST00000435192 860 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 AC105918.1-201ENST00000474399 838 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.07□□□□□ -1.6
CCNA1P78396 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.07□□□□□ -1.6
CCNA1P78396 AC008958.1-201ENST00000511047 682 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 RNU6-513P-201ENST00000516104 104 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNA1P78396 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNA1P78396 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNA1P78396 TVP23BP1-201ENST00000557500 617 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 AC034105.4-201ENST00000568304 277 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNA1P78396 AC112484.5-201ENST00000624189 228 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNA1P78396 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.07□□□□□ -1.6
CCNA1P78396 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCNA1P78396 AL731532.2-201ENST00000623542 1953 ntBASIC5.07□□□□□ -1.6
CCNA1P78396 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNA1P78396 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNA1P78396 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCNA1P78396 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNA1P78396 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCNA1P78396 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNA1P78396 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNA1P78396 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNA1P78396 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCNA1P78396 AC019155.1-201ENST00000382242 574 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 AC099336.2-201ENST00000422457 254 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 RPL21P43-201ENST00000425440 472 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 BMS1P19-201ENST00000433925 393 ntBASIC5.06□□□□□ -1.6
CCNA1P78396 RPL23AP52-201ENST00000439311 478 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms