Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.8□□□□□ -1.48
YBX1P67809 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.8□□□□□ -1.48
YBX1P67809 ELOCP26-201ENST00000436067 329 ntBASIC5.8□□□□□ -1.48
YBX1P67809 PA2G4P6-201ENST00000438325 1197 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC073614.1-201ENST00000438690 650 ntBASIC5.8□□□□□ -1.48
YBX1P67809 RPS26P30-201ENST00000443431 335 ntBASIC5.8□□□□□ -1.48
YBX1P67809 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 SDC4P-201ENST00000453285 601 ntBASIC5.8□□□□□ -1.48
YBX1P67809 ARPC3P2-201ENST00000457786 533 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC068228.1-201ENST00000461723 211 ntBASIC5.8□□□□□ -1.48
YBX1P67809 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.8□□□□□ -1.48
YBX1P67809 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.8□□□□□ -1.48
YBX1P67809 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 MTND5P5-201ENST00000503764 376 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.8□□□□□ -1.48
YBX1P67809 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.8□□□□□ -1.48
YBX1P67809 AC083923.1-201ENST00000523708 376 ntBASIC5.8□□□□□ -1.48
YBX1P67809 OR5AK1P-201ENST00000524837 922 ntBASIC5.8□□□□□ -1.48
YBX1P67809 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
YBX1P67809 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.8□□□□□ -1.48
YBX1P67809 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.8□□□□□ -1.48
YBX1P67809 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.8□□□□□ -1.48
YBX1P67809 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.8□□□□□ -1.48
YBX1P67809 NPM1P42-201ENST00000560329 862 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.8□□□□□ -1.48
YBX1P67809 BPTFP1-201ENST00000579209 492 ntBASIC5.8□□□□□ -1.48
YBX1P67809 UBE2V2P2-201ENST00000587677 504 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC119403.2-201ENST00000590960 598 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.8□□□□□ -1.48
YBX1P67809 AC024560.3-201ENST00000608482 349 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC093388.1-201ENST00000609166 430 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC055764.2-201ENST00000610089 670 ntBASIC5.8□□□□□ -1.48
YBX1P67809 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC241377.1-201ENST00000619797 406 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AC124864.2-201ENST00000624736 186 ntBASIC5.8□□□□□ -1.48
YBX1P67809 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.8□□□□□ -1.48
YBX1P67809 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 AL022323.4-201ENST00000623980 13120 ntBASIC5.8□□□□□ -1.48
YBX1P67809 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
YBX1P67809 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.8□□□□□ -1.48
YBX1P67809 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YBX1P67809 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
YBX1P67809 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
YBX1P67809 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.79□□□□□ -1.48
YBX1P67809 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
YBX1P67809 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
YBX1P67809 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.79□□□□□ -1.48
YBX1P67809 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
YBX1P67809 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
YBX1P67809 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
YBX1P67809 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
YBX1P67809 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
YBX1P67809 AL672167.2-201ENST00000377164 879 ntBASIC5.79□□□□□ -1.48
YBX1P67809 MT-TD-201ENST00000387419 68 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AC004386.1-201ENST00000393214 761 ntBASIC5.79□□□□□ -1.48
YBX1P67809 RN7SKP206-201ENST00000410823 293 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AC013404.1-201ENST00000413068 249 ntBASIC5.79□□□□□ -1.48
YBX1P67809 RPL17P12-201ENST00000413391 526 ntBASIC5.79□□□□□ -1.48
YBX1P67809 RPS7P8-201ENST00000418311 581 ntBASIC5.79□□□□□ -1.48
YBX1P67809 RPL12P12-201ENST00000424633 501 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.79□□□□□ -1.48
YBX1P67809 PRUNEP1-201ENST00000425846 705 ntBASIC5.79□□□□□ -1.48
YBX1P67809 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.79□□□□□ -1.48
YBX1P67809 FMO7P-201ENST00000436045 768 ntBASIC5.79□□□□□ -1.48
YBX1P67809 MTND5P14-201ENST00000441481 1267 ntBASIC5.79□□□□□ -1.48
YBX1P67809 OR7E125P-201ENST00000443450 846 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AC244505.5-201ENST00000443639 207 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AL445466.1-201ENST00000448432 357 ntBASIC5.79□□□□□ -1.48
YBX1P67809 RPL23AP60-201ENST00000450011 454 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.79□□□□□ -1.48
YBX1P67809 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.79□□□□□ -1.48
YBX1P67809 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.79□□□□□ -1.48
YBX1P67809 RPL7P51-201ENST00000490532 749 ntBASIC5.79□□□□□ -1.48
YBX1P67809 RNU6-1153P-201ENST00000516760 105 ntBASIC5.79□□□□□ -1.48
YBX1P67809 IGKV2-19-201ENST00000518132 283 ntBASIC5.79□□□□□ -1.48
YBX1P67809 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.79□□□□□ -1.48
YBX1P67809 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.79□□□□□ -1.48
YBX1P67809 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.79□□□□□ -1.48
YBX1P67809 AC123904.3-201ENST00000547218 814 ntBASIC5.79□□□□□ -1.48
YBX1P67809 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.79□□□□□ -1.48
YBX1P67809 AC005224.3-201ENST00000584683 2140 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.79□□□□□ -1.48
YBX1P67809 AC063977.5-201ENST00000601044 974 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.79□□□□□ -1.48
YBX1P67809 MIR6798-201ENST00000612887 67 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AL021918.2-201ENST00000613415 194 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AL121890.2-201ENST00000617644 465 ntBASIC5.79□□□□□ -1.48
YBX1P67809 STMN1P1-201ENST00000617809 440 ntBASIC5.79□□□□□ -1.48
YBX1P67809 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms