Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL031119.1-201ENST00000404707 1879 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN6P56747 AC135352.1-201ENST00000506173 1418 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN6P56747 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN6P56747 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN6P56747 OR5P1P-201ENST00000299512 925 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CLDN6P56747 RN7SKP202-201ENST00000410439 330 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 OR13Z1P-201ENST00000416141 834 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN6P56747 CKS1BP6-201ENST00000424932 240 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 NPM1P26-201ENST00000426339 738 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 RPS26P4-201ENST00000431743 355 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 OR6C71P-201ENST00000432580 913 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 MTCO3P17-201ENST00000443775 513 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN6P56747 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN6P56747 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN6P56747 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN6P56747 RPS27AP17-201ENST00000463344 455 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 AC112206.1-201ENST00000468416 477 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 AC105918.1-201ENST00000474399 838 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN6P56747 AC020890.1-201ENST00000491837 504 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 AC025164.1-201ENST00000496249 478 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN6P56747 AC109635.6-201ENST00000525487 1113 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 AP000827.1-201ENST00000527814 258 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 AC107918.3-201ENST00000533272 382 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN6P56747 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN6P56747 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN6P56747 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN6P56747 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN6P56747 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN6P56747 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN6P56747 OR7M1P-201ENST00000608946 533 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 AC006453.5-201ENST00000636451 619 ntBASIC4.3□□□□□ -1.72
CLDN6P56747 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 AC123912.3-201ENST00000600907 1367 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN6P56747 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
CLDN6P56747 PPIAP31-201ENST00000405422 495 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 CYCSP19-201ENST00000411715 316 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 SETP15-201ENST00000412724 337 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 AC022022.1-201ENST00000430304 178 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 AL450263.2-201ENST00000439400 589 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 RPS29P7-201ENST00000439662 171 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN6P56747 RHEBP2-201ENST00000450289 600 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 AL935212.3-201ENST00000450729 284 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 ISCUP1-201ENST00000454451 448 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN6P56747 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN6P56747 BTG4P1-201ENST00000510421 183 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN6P56747 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN6P56747 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN6P56747 TVP23BP1-201ENST00000557500 617 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 AC115989.2-201ENST00000578640 563 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 RN7SL600P-201ENST00000581811 299 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN6P56747 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN6P56747 AC024220.1-201ENST00000603675 484 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 AC113403.1-201ENST00000604910 193 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 MIR6875-201ENST00000617506 72 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 EIF2AP4-201ENST00000424793 1781 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CLDN6P56747 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN6P56747 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CLDN6P56747 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN6P56747 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN6P56747 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
CLDN6P56747 CASC19-206ENST00000641028 1430 ntBASIC4.29□□□□□ -1.72
CLDN6P56747 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN6P56747 BTBD10P1-201ENST00000549824 1352 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN6P56747 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN6P56747 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN6P56747 AL121950.1-201ENST00000624993 2077 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms