Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL352984.2-202ENST00000613699 155 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 MAPK10-261ENST00000641050 3109 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
GFRA1P56159 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
GFRA1P56159 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 AC011416.1-201ENST00000514947 1732 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
GFRA1P56159 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
GFRA1P56159 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.59□□□□□ -1.52
GFRA1P56159 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
GFRA1P56159 AC011369.2-201ENST00000624423 1567 ntBASIC5.59□□□□□ -1.52
GFRA1P56159 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.58□□□□□ -1.52
GFRA1P56159 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 AC009313.2-201ENST00000417893 1941 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
GFRA1P56159 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 COX6B1P3-201ENST00000312310 260 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 RNU1-85P-201ENST00000364127 164 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 Y_RNA.296-201ENST00000364930 108 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 MIR92A2-201ENST00000385299 75 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 HMGB1P17-201ENST00000403495 628 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 AL078604.1-201ENST00000404609 466 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 RPS3AP3-201ENST00000411933 242 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 C1DP2-201ENST00000418167 426 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 AL513174.1-201ENST00000423182 629 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.58□□□□□ -1.52
GFRA1P56159 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 AC023141.3-201ENST00000436698 278 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 AL450263.2-201ENST00000439400 589 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 AMYP1-201ENST00000440059 1023 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 RPS15AP17-201ENST00000470598 390 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 PRMT5P1-201ENST00000514351 598 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 RNA5SP400-201ENST00000517155 111 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 MTCO2P4-201ENST00000517968 247 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 TPM3P3-201ENST00000521343 354 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 AP005639.1-201ENST00000526939 192 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.58□□□□□ -1.52
GFRA1P56159 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 AC012417.1-201ENST00000582307 1039 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 MIR4307-201ENST00000582802 84 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.58□□□□□ -1.52
GFRA1P56159 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.58□□□□□ -1.52
GFRA1P56159 AC091193.1-201ENST00000604640 448 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 AL161729.4-201ENST00000604650 476 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 AC023813.4-201ENST00000607580 580 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 AC092266.1-201ENST00000610958 165 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 AL512652.1-201ENST00000619006 500 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
GFRA1P56159 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.58□□□□□ -1.52
GFRA1P56159 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
GFRA1P56159 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GFRA1P56159 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
GFRA1P56159 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
GFRA1P56159 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
GFRA1P56159 AP002001.2-201ENST00000529025 1469 ntBASIC5.58□□□□□ -1.52
GFRA1P56159 SNX18P3-202ENST00000565670 1750 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 AC107081.3-201ENST00000612715 2034 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
GFRA1P56159 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.57□□□□□ -1.52
GFRA1P56159 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
GFRA1P56159 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.57□□□□□ -1.52
GFRA1P56159 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms