Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8□□□□□ -1.13
NUBP1P53384 CDY18P-201ENST00000438294 1609 ntBASIC8□□□□□ -1.13
NUBP1P53384 ATP5A1P10-201ENST00000622403 1603 ntBASIC8□□□□□ -1.13
NUBP1P53384 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC8□□□□□ -1.13
NUBP1P53384 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC8□□□□□ -1.13
NUBP1P53384 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 Y_RNA.76-201ENST00000362931 109 ntBASIC8□□□□□ -1.13
NUBP1P53384 CRP-202ENST00000368110 667 ntTSL 3 BASIC8□□□□□ -1.13
NUBP1P53384 Y_RNA.541-201ENST00000384640 113 ntBASIC8□□□□□ -1.13
NUBP1P53384 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8□□□□□ -1.13
NUBP1P53384 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC8□□□□□ -1.13
NUBP1P53384 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC8□□□□□ -1.13
NUBP1P53384 CD302-202ENST00000429078 3803 ntTSL 2 BASIC8□□□□□ -1.13
NUBP1P53384 DDX11L10-201ENST00000430178 571 ntBASIC8□□□□□ -1.13
NUBP1P53384 AL591043.1-201ENST00000432461 424 ntBASIC8□□□□□ -1.13
NUBP1P53384 RPL12P11-201ENST00000439970 501 ntBASIC8□□□□□ -1.13
NUBP1P53384 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8□□□□□ -1.13
NUBP1P53384 AC013429.1-201ENST00000456604 422 ntBASIC8□□□□□ -1.13
NUBP1P53384 SNORA35.1-201ENST00000458908 128 ntBASIC8□□□□□ -1.13
NUBP1P53384 AC022034.3-201ENST00000471393 478 ntBASIC8□□□□□ -1.13
NUBP1P53384 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8□□□□□ -1.13
NUBP1P53384 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8□□□□□ -1.13
NUBP1P53384 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC8□□□□□ -1.13
NUBP1P53384 AC068790.4-201ENST00000602474 263 ntBASIC8□□□□□ -1.13
NUBP1P53384 AL121917.1-203ENST00000605534 577 ntBASIC8□□□□□ -1.13
NUBP1P53384 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
NUBP1P53384 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 AC116158.1-201ENST00000560231 2129 ntBASIC8□□□□□ -1.13
NUBP1P53384 AC012513.3-201ENST00000623250 2116 ntBASIC8□□□□□ -1.13
NUBP1P53384 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC8□□□□□ -1.13
NUBP1P53384 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
NUBP1P53384 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 ABCF2P1-201ENST00000465687 1867 ntBASIC8□□□□□ -1.13
NUBP1P53384 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC8□□□□□ -1.13
NUBP1P53384 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC7.99□□□□□ -1.13
NUBP1P53384 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.99□□□□□ -1.13
NUBP1P53384 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
NUBP1P53384 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.99□□□□□ -1.13
NUBP1P53384 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 Y_RNA.533-201ENST00000384596 114 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 AL033519.2-201ENST00000403958 392 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 KRT18P52-201ENST00000404956 846 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.99□□□□□ -1.13
NUBP1P53384 VTI1BP4-201ENST00000427516 527 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.99□□□□□ -1.13
NUBP1P53384 AC064862.5-201ENST00000440618 334 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 AC005840.2-201ENST00000447193 355 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 NUTF2P3-201ENST00000448540 384 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 TPT1P13-201ENST00000449760 499 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 CFL1P4-201ENST00000451536 498 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 SNRPD2P1-201ENST00000489253 354 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.99□□□□□ -1.13
NUBP1P53384 RPL7P47-201ENST00000497299 556 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 NDUFA3P2-201ENST00000531434 232 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 MEG8-215ENST00000555354 469 ntTSL 3 BASIC7.99□□□□□ -1.13
NUBP1P53384 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC7.99□□□□□ -1.13
NUBP1P53384 AC136932.1-201ENST00000574771 208 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 RN7SL802P-201ENST00000577858 299 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 MIR5701-3-201ENST00000578890 82 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 CPDP1-201ENST00000579660 283 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 MIR5701-1-201ENST00000585138 82 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC7.99□□□□□ -1.13
NUBP1P53384 MIR6780B-201ENST00000610307 79 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 MIR5701-2-201ENST00000615634 82 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
NUBP1P53384 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC7.99□□□□□ -1.13
NUBP1P53384 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC7.99□□□□□ -1.13
NUBP1P53384 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 AC093849.1-201ENST00000563631 2209 ntBASIC7.99□□□□□ -1.13
NUBP1P53384 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 DIAPH3-203ENST00000400319 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NUBP1P53384 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.99□□□□□ -1.13
NUBP1P53384 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC7.98□□□□□ -1.13
NUBP1P53384 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms