Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 AP000916.1-201ENST00000533869 835 ntBASIC4.64□□□□□ -1.67
PDX1P52945 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.64□□□□□ -1.67
PDX1P52945 RN7SL802P-201ENST00000577858 299 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AP005119.2-201ENST00000579735 1105 ntBASIC4.64□□□□□ -1.67
PDX1P52945 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.64□□□□□ -1.67
PDX1P52945 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.64□□□□□ -1.67
PDX1P52945 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.64□□□□□ -1.67
PDX1P52945 AP005229.2-201ENST00000609980 697 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AL121873.1-201ENST00000616013 524 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AL049794.2-201ENST00000616301 365 ntBASIC4.64□□□□□ -1.67
PDX1P52945 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.64□□□□□ -1.67
PDX1P52945 AC119674.1-212ENST00000641155 993 ntBASIC4.64□□□□□ -1.67
PDX1P52945 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 AC139713.2-214ENST00000642059 1811 ntBASIC4.64□□□□□ -1.67
PDX1P52945 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDX1P52945 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.64□□□□□ -1.67
PDX1P52945 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.63□□□□□ -1.67
PDX1P52945 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDX1P52945 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDX1P52945 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDX1P52945 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDX1P52945 AC008758.3-201ENST00000507003 1829 ntBASIC4.63□□□□□ -1.67
PDX1P52945 HSPA8P19-201ENST00000505359 1517 ntBASIC4.63□□□□□ -1.67
PDX1P52945 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
PDX1P52945 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.63□□□□□ -1.67
PDX1P52945 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDX1P52945 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PDX1P52945 SNORD113.2-201ENST00000364166 89 ntBASIC4.63□□□□□ -1.67
PDX1P52945 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDX1P52945 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDX1P52945 RPS27AP11-201ENST00000402798 447 ntBASIC4.63□□□□□ -1.67
PDX1P52945 RSL24D1P1-201ENST00000404972 493 ntBASIC4.63□□□□□ -1.67
PDX1P52945 RN7SKP222-201ENST00000410651 315 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.63□□□□□ -1.67
PDX1P52945 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 QRSL1P2-201ENST00000418582 964 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 FO393414.1-201ENST00000428697 1184 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AC073052.1-201ENST00000440417 714 ntBASIC4.63□□□□□ -1.67
PDX1P52945 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.63□□□□□ -1.67
PDX1P52945 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 AC021205.1-201ENST00000468797 348 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AC013356.1-201ENST00000489027 564 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.63□□□□□ -1.67
PDX1P52945 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.63□□□□□ -1.67
PDX1P52945 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.63□□□□□ -1.67
PDX1P52945 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 IGKV2D-10-201ENST00000520194 281 ntBASIC4.63□□□□□ -1.67
PDX1P52945 RPL23AP53-201ENST00000521854 457 ntBASIC4.63□□□□□ -1.67
PDX1P52945 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.63□□□□□ -1.67
PDX1P52945 AC005868.1-201ENST00000536421 331 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.63□□□□□ -1.67
PDX1P52945 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.63□□□□□ -1.67
PDX1P52945 AL049839.1-201ENST00000556151 657 ntBASIC4.63□□□□□ -1.67
PDX1P52945 PARP1P2-201ENST00000556806 195 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.63□□□□□ -1.67
PDX1P52945 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.63□□□□□ -1.67
PDX1P52945 AC106734.1-201ENST00000568646 663 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 SS18L2P2-201ENST00000583960 235 ntBASIC4.63□□□□□ -1.67
PDX1P52945 RPL12P25-202ENST00000598100 674 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AC073091.2-201ENST00000603205 907 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AC020910.2-201ENST00000603635 610 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AL590392.1-201ENST00000604960 446 ntBASIC4.63□□□□□ -1.67
PDX1P52945 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.63□□□□□ -1.67
PDX1P52945 AC011815.3-201ENST00000624194 473 ntBASIC4.63□□□□□ -1.67
PDX1P52945 OR52H1-202ENST00000641796 1061 ntBASIC4.63□□□□□ -1.67
PDX1P52945 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PDX1P52945 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDX1P52945 AC008432.1-201ENST00000615912 1320 ntBASIC4.63□□□□□ -1.67
PDX1P52945 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
PDX1P52945 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.63□□□□□ -1.67
PDX1P52945 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDX1P52945 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.63□□□□□ -1.67
PDX1P52945 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.63□□□□□ -1.67
PDX1P52945 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.62□□□□□ -1.67
PDX1P52945 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PDX1P52945 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.62□□□□□ -1.67
PDX1P52945 AC025574.1-201ENST00000554784 1653 ntBASIC4.62□□□□□ -1.67
PDX1P52945 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.62□□□□□ -1.67
PDX1P52945 SNORA73.1-201ENST00000363107 205 ntBASIC4.62□□□□□ -1.67
PDX1P52945 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDX1P52945 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDX1P52945 RNA5SP397-201ENST00000391323 118 ntBASIC4.62□□□□□ -1.67
PDX1P52945 ATF1P1-201ENST00000406040 927 ntBASIC4.62□□□□□ -1.67
PDX1P52945 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms