Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.89□□□□□ -1.79
SRP9P49458 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.89□□□□□ -1.79
SRP9P49458 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.89□□□□□ -1.79
SRP9P49458 AC105129.1-201ENST00000560250 297 ntBASIC3.89□□□□□ -1.79
SRP9P49458 AC124068.1-201ENST00000563131 678 ntBASIC3.89□□□□□ -1.79
SRP9P49458 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.89□□□□□ -1.79
SRP9P49458 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.89□□□□□ -1.79
SRP9P49458 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.89□□□□□ -1.79
SRP9P49458 ADAD1P2-201ENST00000588476 646 ntBASIC3.89□□□□□ -1.79
SRP9P49458 AC090181.2-201ENST00000602975 672 ntBASIC3.89□□□□□ -1.79
SRP9P49458 AC073091.2-201ENST00000603205 907 ntBASIC3.89□□□□□ -1.79
SRP9P49458 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.89□□□□□ -1.79
SRP9P49458 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.89□□□□□ -1.79
SRP9P49458 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.89□□□□□ -1.79
SRP9P49458 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.89□□□□□ -1.79
SRP9P49458 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.89□□□□□ -1.79
SRP9P49458 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRP9P49458 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.89□□□□□ -1.79
SRP9P49458 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SRP9P49458 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.89□□□□□ -1.79
SRP9P49458 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 DHX40P1-201ENST00000588725 1412 ntBASIC3.88□□□□□ -1.79
SRP9P49458 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.88□□□□□ -1.79
SRP9P49458 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 RNVU1-6-201ENST00000364688 164 ntBASIC3.88□□□□□ -1.79
SRP9P49458 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 SNORA70F-201ENST00000384142 135 ntBASIC3.88□□□□□ -1.79
SRP9P49458 UBTFL3-201ENST00000418934 1024 ntBASIC3.88□□□□□ -1.79
SRP9P49458 UQCRBP1-201ENST00000421129 336 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 PRELID3BP10-201ENST00000431957 584 ntBASIC3.88□□□□□ -1.79
SRP9P49458 BX119904.1-201ENST00000432026 348 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 RPL36AP15-201ENST00000444514 266 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.88□□□□□ -1.79
SRP9P49458 CEACAMP6-201ENST00000452007 574 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 EIF2S2P4-201ENST00000461070 984 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AC092905.1-201ENST00000467527 949 ntBASIC3.88□□□□□ -1.79
SRP9P49458 UBTFL6-201ENST00000477929 1024 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AP000926.1-201ENST00000479573 241 ntBASIC3.88□□□□□ -1.79
SRP9P49458 IGLV2-34-201ENST00000490007 283 ntBASIC3.88□□□□□ -1.79
SRP9P49458 RPL23AP72-201ENST00000492447 435 ntBASIC3.88□□□□□ -1.79
SRP9P49458 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.88□□□□□ -1.79
SRP9P49458 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.88□□□□□ -1.79
SRP9P49458 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.88□□□□□ -1.79
SRP9P49458 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.88□□□□□ -1.79
SRP9P49458 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.88□□□□□ -1.79
SRP9P49458 MIR4644-201ENST00000579929 84 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.88□□□□□ -1.79
SRP9P49458 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.88□□□□□ -1.79
SRP9P49458 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.88□□□□□ -1.79
SRP9P49458 AC023762.1-201ENST00000603280 584 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AL160290.3-201ENST00000604869 165 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.88□□□□□ -1.79
SRP9P49458 AC019193.2-201ENST00000610012 634 ntBASIC3.88□□□□□ -1.79
SRP9P49458 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.88□□□□□ -1.79
SRP9P49458 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.88□□□□□ -1.79
SRP9P49458 VPS35P1-201ENST00000563400 1518 ntBASIC3.88□□□□□ -1.79
SRP9P49458 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRP9P49458 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.88□□□□□ -1.79
SRP9P49458 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SRP9P49458 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.87□□□□□ -1.79
SRP9P49458 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SRP9P49458 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SRP9P49458 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SRP9P49458 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SRP9P49458 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.87□□□□□ -1.79
SRP9P49458 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SRP9P49458 RPS23P10-201ENST00000416185 486 ntBASIC3.87□□□□□ -1.79
SRP9P49458 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.87□□□□□ -1.79
SRP9P49458 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.87□□□□□ -1.79
SRP9P49458 AC245028.1-201ENST00000423259 256 ntBASIC3.87□□□□□ -1.79
SRP9P49458 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.87□□□□□ -1.79
SRP9P49458 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.87□□□□□ -1.79
SRP9P49458 ELOCP8-201ENST00000439309 332 ntBASIC3.87□□□□□ -1.79
SRP9P49458 ELOCP15-201ENST00000442090 332 ntBASIC3.87□□□□□ -1.79
SRP9P49458 FHP1-201ENST00000442741 703 ntBASIC3.87□□□□□ -1.79
SRP9P49458 TXNP2-201ENST00000443918 295 ntBASIC3.87□□□□□ -1.79
SRP9P49458 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.87□□□□□ -1.79
SRP9P49458 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.87□□□□□ -1.79
SRP9P49458 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.87□□□□□ -1.79
SRP9P49458 AL645939.1-201ENST00000453429 797 ntBASIC3.87□□□□□ -1.79
SRP9P49458 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.87□□□□□ -1.79
SRP9P49458 RN7SL205P-201ENST00000490174 284 ntBASIC3.87□□□□□ -1.79
SRP9P49458 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.87□□□□□ -1.79
SRP9P49458 AC020593.1-201ENST00000507399 299 ntBASIC3.87□□□□□ -1.79
SRP9P49458 AL592156.1-201ENST00000508758 304 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms