Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPA3P35244 AC113430.1-201ENST00000506872 718 ntBASIC4.29□□□□□ -1.72
RPA3P35244 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.29□□□□□ -1.72
RPA3P35244 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.29□□□□□ -1.72
RPA3P35244 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.29□□□□□ -1.72
RPA3P35244 OR5BC1P-201ENST00000529327 739 ntBASIC4.29□□□□□ -1.72
RPA3P35244 AC122134.1-201ENST00000565664 1104 ntBASIC4.29□□□□□ -1.72
RPA3P35244 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RPA3P35244 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.29□□□□□ -1.72
RPA3P35244 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.29□□□□□ -1.72
RPA3P35244 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.29□□□□□ -1.72
RPA3P35244 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.29□□□□□ -1.72
RPA3P35244 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.29□□□□□ -1.72
RPA3P35244 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPA3P35244 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPA3P35244 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RPA3P35244 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPA3P35244 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPA3P35244 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RPA3P35244 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RPA3P35244 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPA3P35244 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPA3P35244 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RPA3P35244 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RPA3P35244 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RPA3P35244 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPA3P35244 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
RPA3P35244 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPA3P35244 IGKV7-3-201ENST00000357453 298 ntBASIC4.28□□□□□ -1.72
RPA3P35244 MIR3065-201ENST00000390137 79 ntBASIC4.28□□□□□ -1.72
RPA3P35244 AP000357.1-201ENST00000409926 1165 ntBASIC4.28□□□□□ -1.72
RPA3P35244 TMSB10P2-201ENST00000416049 131 ntBASIC4.28□□□□□ -1.72
RPA3P35244 MTCO1P51-201ENST00000427672 1060 ntBASIC4.28□□□□□ -1.72
RPA3P35244 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.28□□□□□ -1.72
RPA3P35244 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.28□□□□□ -1.72
RPA3P35244 MTND4LP12-201ENST00000448237 295 ntBASIC4.28□□□□□ -1.72
RPA3P35244 NPM1P39-201ENST00000449818 867 ntBASIC4.28□□□□□ -1.72
RPA3P35244 OR52Y1P-201ENST00000452418 828 ntBASIC4.28□□□□□ -1.72
RPA3P35244 Z95152.1-201ENST00000453556 656 ntBASIC4.28□□□□□ -1.72
RPA3P35244 AC096741.1-201ENST00000472250 846 ntBASIC4.28□□□□□ -1.72
RPA3P35244 AC006463.2-201ENST00000473326 348 ntBASIC4.28□□□□□ -1.72
RPA3P35244 RN7SL459P-201ENST00000481078 302 ntBASIC4.28□□□□□ -1.72
RPA3P35244 RN7SL812P-201ENST00000493791 279 ntBASIC4.28□□□□□ -1.72
RPA3P35244 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.28□□□□□ -1.72
RPA3P35244 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.28□□□□□ -1.72
RPA3P35244 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.28□□□□□ -1.72
RPA3P35244 AC096553.1-201ENST00000605169 829 ntBASIC4.28□□□□□ -1.72
RPA3P35244 AL035461.2-201ENST00000619201 524 ntBASIC4.28□□□□□ -1.72
RPA3P35244 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.28□□□□□ -1.72
RPA3P35244 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.28□□□□□ -1.72
RPA3P35244 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPA3P35244 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.28□□□□□ -1.72
RPA3P35244 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPA3P35244 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPA3P35244 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPA3P35244 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPA3P35244 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RPA3P35244 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.28□□□□□ -1.72
RPA3P35244 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.27□□□□□ -1.73
RPA3P35244 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPA3P35244 RLIMP2-201ENST00000427891 1563 ntBASIC4.27□□□□□ -1.73
RPA3P35244 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.27□□□□□ -1.73
RPA3P35244 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.27□□□□□ -1.73
RPA3P35244 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.27□□□□□ -1.73
RPA3P35244 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RPA3P35244 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPA3P35244 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.27□□□□□ -1.73
RPA3P35244 AL592182.3-201ENST00000642132 3304 ntBASIC4.27□□□□□ -1.73
RPA3P35244 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPA3P35244 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RPA3P35244 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.27□□□□□ -1.73
RPA3P35244 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPA3P35244 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.27□□□□□ -1.73
RPA3P35244 RNA5SP447-201ENST00000363749 119 ntBASIC4.27□□□□□ -1.73
RPA3P35244 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
RPA3P35244 RNU6-167P-201ENST00000384292 106 ntBASIC4.27□□□□□ -1.73
RPA3P35244 SNORA37-201ENST00000384504 129 ntBASIC4.27□□□□□ -1.73
RPA3P35244 RN7SKP247-201ENST00000411094 308 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.27□□□□□ -1.73
RPA3P35244 FTH1P16-201ENST00000435241 552 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.27□□□□□ -1.73
RPA3P35244 TPT1P13-201ENST00000449760 499 ntBASIC4.27□□□□□ -1.73
RPA3P35244 HSPE1P22-201ENST00000456856 327 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.27□□□□□ -1.73
RPA3P35244 AC053481.1-201ENST00000467217 306 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.27□□□□□ -1.73
RPA3P35244 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.27□□□□□ -1.73
RPA3P35244 AC013356.1-201ENST00000489027 564 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.27□□□□□ -1.73
RPA3P35244 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.27□□□□□ -1.73
RPA3P35244 AC006064.5-201ENST00000541782 248 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AL109766.1-201ENST00000555080 552 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.27□□□□□ -1.73
RPA3P35244 AC079587.1-201ENST00000603846 277 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AL713998.2-201ENST00000604538 1198 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AC090948.1-201ENST00000607464 549 ntBASIC4.27□□□□□ -1.73
RPA3P35244 AP001005.3-201ENST00000622049 129 ntBASIC4.27□□□□□ -1.73
RPA3P35244 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.27□□□□□ -1.73
RPA3P35244 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.27□□□□□ -1.73
RPA3P35244 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms