Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
RXRBP28702 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
RXRBP28702 AC022893.2-201ENST00000564832 3296 ntBASIC7.14□□□□□ -1.27
RXRBP28702 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RXRBP28702 Y_RNA.11-201ENST00000362375 109 ntBASIC7.14□□□□□ -1.27
RXRBP28702 U3.4-201ENST00000363352 213 ntBASIC7.14□□□□□ -1.27
RXRBP28702 RNU1-64P-201ENST00000365443 163 ntBASIC7.14□□□□□ -1.27
RXRBP28702 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.14□□□□□ -1.27
RXRBP28702 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RXRBP28702 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 MT-RNR2-201ENST00000387347 1559 ntBASIC7.14□□□□□ -1.27
RXRBP28702 U3.22-201ENST00000391120 215 ntBASIC7.14□□□□□ -1.27
RXRBP28702 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 RN7SKP151-201ENST00000410230 316 ntBASIC7.14□□□□□ -1.27
RXRBP28702 RN7SKP142-201ENST00000411236 328 ntBASIC7.14□□□□□ -1.27
RXRBP28702 RPS21P8-201ENST00000413365 247 ntBASIC7.14□□□□□ -1.27
RXRBP28702 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.14□□□□□ -1.27
RXRBP28702 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.14□□□□□ -1.27
RXRBP28702 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RXRBP28702 DDX39BP1-205ENST00000422507 192 ntBASIC7.14□□□□□ -1.27
RXRBP28702 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.14□□□□□ -1.27
RXRBP28702 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.14□□□□□ -1.27
RXRBP28702 SEPT14P24-201ENST00000447236 180 ntBASIC7.14□□□□□ -1.27
RXRBP28702 IGBP1P3-201ENST00000447449 1000 ntBASIC7.14□□□□□ -1.27
RXRBP28702 WASF1P1-201ENST00000447560 1131 ntBASIC7.14□□□□□ -1.27
RXRBP28702 MTCO1P48-201ENST00000448024 1096 ntBASIC7.14□□□□□ -1.27
RXRBP28702 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.14□□□□□ -1.27
RXRBP28702 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 TPT1P7-201ENST00000458300 517 ntBASIC7.14□□□□□ -1.27
RXRBP28702 SNORA84-201ENST00000459229 133 ntBASIC7.14□□□□□ -1.27
RXRBP28702 HMGN2P25-201ENST00000486956 268 ntBASIC7.14□□□□□ -1.27
RXRBP28702 AC096751.1-202ENST00000502691 1067 ntBASIC7.14□□□□□ -1.27
RXRBP28702 AK3P4-201ENST00000504283 583 ntBASIC7.14□□□□□ -1.27
RXRBP28702 DSTNP2-201ENST00000504533 515 ntBASIC7.14□□□□□ -1.27
RXRBP28702 KRT19P6-201ENST00000510983 209 ntBASIC7.14□□□□□ -1.27
RXRBP28702 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 AC116347.2-201ENST00000514912 523 ntBASIC7.14□□□□□ -1.27
RXRBP28702 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC7.14□□□□□ -1.27
RXRBP28702 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.14□□□□□ -1.27
RXRBP28702 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.14□□□□□ -1.27
RXRBP28702 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC7.14□□□□□ -1.27
RXRBP28702 AL121579.1-201ENST00000555129 305 ntBASIC7.14□□□□□ -1.27
RXRBP28702 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC7.14□□□□□ -1.27
RXRBP28702 AC005341.1-201ENST00000571086 708 ntBASIC7.14□□□□□ -1.27
RXRBP28702 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.14□□□□□ -1.27
RXRBP28702 MIR4999-201ENST00000585029 91 ntBASIC7.14□□□□□ -1.27
RXRBP28702 AC019131.2-201ENST00000609071 870 ntBASIC7.14□□□□□ -1.27
RXRBP28702 AC092954.2-201ENST00000609103 430 ntBASIC7.14□□□□□ -1.27
RXRBP28702 AC107075.1-201ENST00000613695 314 ntBASIC7.14□□□□□ -1.27
RXRBP28702 AC126177.8-201ENST00000618339 1015 ntBASIC7.14□□□□□ -1.27
RXRBP28702 OR5AK4P-201ENST00000635912 903 ntBASIC7.14□□□□□ -1.27
RXRBP28702 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.14□□□□□ -1.27
RXRBP28702 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RXRBP28702 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RXRBP28702 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.14□□□□□ -1.27
RXRBP28702 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RXRBP28702 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.14□□□□□ -1.27
RXRBP28702 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.14□□□□□ -1.27
RXRBP28702 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
RXRBP28702 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RXRBP28702 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RXRBP28702 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RXRBP28702 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RXRBP28702 NXF4-202ENST00000416098 1465 ntBASIC7.13□□□□□ -1.27
RXRBP28702 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC7.13□□□□□ -1.27
RXRBP28702 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RXRBP28702 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.13□□□□□ -1.27
RXRBP28702 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC7.13□□□□□ -1.27
RXRBP28702 MTND4LP17-201ENST00000414607 293 ntBASIC7.13□□□□□ -1.27
RXRBP28702 AC245052.5-201ENST00000416320 649 ntBASIC7.13□□□□□ -1.27
RXRBP28702 EIF4A1P1-201ENST00000420241 934 ntBASIC7.13□□□□□ -1.27
RXRBP28702 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.13□□□□□ -1.27
RXRBP28702 AL359265.2-201ENST00000434367 631 ntBASIC7.13□□□□□ -1.27
RXRBP28702 AL354941.1-201ENST00000438600 464 ntBASIC7.13□□□□□ -1.27
RXRBP28702 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.13□□□□□ -1.27
RXRBP28702 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.13□□□□□ -1.27
RXRBP28702 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
RXRBP28702 MYL12BP2-201ENST00000503948 512 ntBASIC7.13□□□□□ -1.27
RXRBP28702 RNU6-405P-201ENST00000516637 110 ntBASIC7.13□□□□□ -1.27
RXRBP28702 AC109635.6-201ENST00000525487 1113 ntBASIC7.13□□□□□ -1.27
RXRBP28702 DEFB130C-202ENST00000530001 230 ntBASIC7.13□□□□□ -1.27
RXRBP28702 AP001317.1-201ENST00000531194 960 ntBASIC7.13□□□□□ -1.27
RXRBP28702 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms