Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFSF4P23510 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.96□□□□□ -1.62
TNFSF4P23510 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TNFSF4P23510 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.96□□□□□ -1.62
TNFSF4P23510 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TNFSF4P23510 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TNFSF4P23510 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.96□□□□□ -1.62
TNFSF4P23510 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TNFSF4P23510 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 OR56B2P-201ENST00000317102 954 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 MIR375-201ENST00000362103 64 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 RNU6-984P-201ENST00000363236 109 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 RNU6-931P-201ENST00000363850 107 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 SSXP10-201ENST00000402595 565 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AL023807.1-201ENST00000407932 359 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC245060.4-201ENST00000413293 1121 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC008072.1-201ENST00000434254 824 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.95□□□□□ -1.62
TNFSF4P23510 MTCYBP11-201ENST00000447254 1109 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 MTND2P19-201ENST00000449129 1012 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC084754.1-201ENST00000463466 464 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC022215.1-201ENST00000481770 362 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 ST13P12-201ENST00000508958 1094 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFSF4P23510 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 OR5AZ1P-201ENST00000527448 943 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFSF4P23510 OR5AN2P-201ENST00000534535 896 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.95□□□□□ -1.62
TNFSF4P23510 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.95□□□□□ -1.62
TNFSF4P23510 ELOCP32-201ENST00000548625 324 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.95□□□□□ -1.62
TNFSF4P23510 AL389895.1-201ENST00000554127 252 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 IGBP1P1-201ENST00000554337 1009 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AL390334.1-201ENST00000556395 450 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC090312.1-201ENST00000580637 348 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.95□□□□□ -1.62
TNFSF4P23510 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFSF4P23510 AC010503.3-201ENST00000594355 540 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC006272.2-201ENST00000594725 163 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFSF4P23510 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.95□□□□□ -1.62
TNFSF4P23510 AC103881.1-201ENST00000603476 538 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AL133507.1-201ENST00000605269 557 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC018638.7-201ENST00000605836 1114 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC245297.2-201ENST00000610119 565 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AP000894.4-201ENST00000610185 483 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFSF4P23510 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 AC090607.5-201ENST00000615692 224 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 AC078883.4-201ENST00000623218 367 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.95□□□□□ -1.62
TNFSF4P23510 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
TNFSF4P23510 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 AL049555.1-201ENST00000562834 1933 ntBASIC4.95□□□□□ -1.62
TNFSF4P23510 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TNFSF4P23510 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
TNFSF4P23510 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFSF4P23510 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFSF4P23510 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TNFSF4P23510 AC093591.2-201ENST00000565254 3843 ntBASIC4.94□□□□□ -1.62
TNFSF4P23510 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TNFSF4P23510 AC004817.4-201ENST00000602396 3625 ntBASIC4.94□□□□□ -1.62
TNFSF4P23510 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFSF4P23510 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TNFSF4P23510 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFSF4P23510 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TNFSF4P23510 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.94□□□□□ -1.62
TNFSF4P23510 RN7SKP29-201ENST00000410957 272 ntBASIC4.94□□□□□ -1.62
TNFSF4P23510 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFSF4P23510 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.94□□□□□ -1.62
TNFSF4P23510 IPPKP1-201ENST00000422501 768 ntBASIC4.94□□□□□ -1.62
TNFSF4P23510 AL354766.1-201ENST00000423396 542 ntBASIC4.94□□□□□ -1.62
TNFSF4P23510 AC012519.1-201ENST00000424588 610 ntBASIC4.94□□□□□ -1.62
TNFSF4P23510 AL022331.1-201ENST00000429025 477 ntBASIC4.94□□□□□ -1.62
TNFSF4P23510 AC079807.1-201ENST00000429993 481 ntBASIC4.94□□□□□ -1.62
TNFSF4P23510 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.94□□□□□ -1.62
TNFSF4P23510 AC073410.1-201ENST00000435125 589 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms