Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.08□□□□□ -1.12
PTPREP23469 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.08□□□□□ -1.12
PTPREP23469 RNU6-864P-201ENST00000516256 108 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AC087854.1-201ENST00000519706 414 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.08□□□□□ -1.12
PTPREP23469 OR5BK1P-201ENST00000550421 823 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.08□□□□□ -1.12
PTPREP23469 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.08□□□□□ -1.12
PTPREP23469 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 MIR212-201ENST00000586026 110 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC8.08□□□□□ -1.12
PTPREP23469 RPL7AP69-201ENST00000595306 806 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AC011468.4-201ENST00000603942 409 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AP003789.1-201ENST00000617737 605 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AL122023.1-201ENST00000622847 530 ntBASIC8.08□□□□□ -1.12
PTPREP23469 MIR6503-201ENST00000622884 86 ntBASIC8.08□□□□□ -1.12
PTPREP23469 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPREP23469 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPREP23469 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.08□□□□□ -1.12
PTPREP23469 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
PTPREP23469 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
PTPREP23469 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
PTPREP23469 AC125603.4-201ENST00000621942 2699 ntBASIC8.07□□□□□ -1.12
PTPREP23469 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 Z83820.1-201ENST00000456978 1499 ntBASIC8.07□□□□□ -1.12
PTPREP23469 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
PTPREP23469 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.07□□□□□ -1.12
PTPREP23469 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
PTPREP23469 RNU1-5P-201ENST00000362684 144 ntBASIC8.07□□□□□ -1.12
PTPREP23469 Y_RNA.46-201ENST00000362695 102 ntBASIC8.07□□□□□ -1.12
PTPREP23469 RNU6-1097P-201ENST00000363586 107 ntBASIC8.07□□□□□ -1.12
PTPREP23469 RN7SKP250-201ENST00000363924 321 ntBASIC8.07□□□□□ -1.12
PTPREP23469 RNU6-289P-201ENST00000364093 107 ntBASIC8.07□□□□□ -1.12
PTPREP23469 MIR1-2-201ENST00000384961 85 ntBASIC8.07□□□□□ -1.12
PTPREP23469 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 AL133260.1-201ENST00000405720 405 ntBASIC8.07□□□□□ -1.12
PTPREP23469 METTL15P3-201ENST00000415522 1221 ntBASIC8.07□□□□□ -1.12
PTPREP23469 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.07□□□□□ -1.12
PTPREP23469 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC8.07□□□□□ -1.12
PTPREP23469 AC000089.1-201ENST00000424559 801 ntBASIC8.07□□□□□ -1.12
PTPREP23469 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.07□□□□□ -1.12
PTPREP23469 GPR143P-201ENST00000434155 205 ntBASIC8.07□□□□□ -1.12
PTPREP23469 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
PTPREP23469 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC8.07□□□□□ -1.12
PTPREP23469 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.07□□□□□ -1.12
PTPREP23469 TVP23CP1-201ENST00000450317 639 ntBASIC8.07□□□□□ -1.12
PTPREP23469 AC092324.1-201ENST00000468671 324 ntBASIC8.07□□□□□ -1.12
PTPREP23469 RPL23AP8-201ENST00000479812 475 ntBASIC8.07□□□□□ -1.12
PTPREP23469 AC104687.1-201ENST00000485829 412 ntBASIC8.07□□□□□ -1.12
PTPREP23469 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC8.07□□□□□ -1.12
PTPREP23469 APOBEC3AP1-201ENST00000511396 287 ntBASIC8.07□□□□□ -1.12
PTPREP23469 RNU4-29P-201ENST00000515943 174 ntBASIC8.07□□□□□ -1.12
PTPREP23469 RNY3P15-201ENST00000516297 97 ntBASIC8.07□□□□□ -1.12
PTPREP23469 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 OR5M2P-201ENST00000529003 936 ntBASIC8.07□□□□□ -1.12
PTPREP23469 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC8.07□□□□□ -1.12
PTPREP23469 AC022882.1-201ENST00000532142 501 ntBASIC8.07□□□□□ -1.12
PTPREP23469 RRN3P3-201ENST00000549207 578 ntBASIC8.07□□□□□ -1.12
PTPREP23469 FXNP1-201ENST00000555153 337 ntBASIC8.07□□□□□ -1.12
PTPREP23469 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC8.07□□□□□ -1.12
PTPREP23469 AC113195.1-201ENST00000579952 141 ntBASIC8.07□□□□□ -1.12
PTPREP23469 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.07□□□□□ -1.12
PTPREP23469 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
PTPREP23469 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
PTPREP23469 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
PTPREP23469 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PTPREP23469 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms