Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 RNA5SP191-201ENST00000362585 102 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 HMGB1P13-201ENST00000406019 642 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 OR51B3P-201ENST00000412287 913 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 RSU1P3-201ENST00000412878 835 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 DYNLL1P7-201ENST00000429273 258 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 RPS26P2-201ENST00000440331 348 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AL353093.1-201ENST00000441292 436 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 TPTE2P6-202ENST00000445572 1007 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 H2AFZP5-201ENST00000446960 382 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 RPS20P4-201ENST00000461659 355 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 CABYRP1-201ENST00000465493 1045 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 RN7SKP276-201ENST00000516242 268 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 SOX5P1-201ENST00000524155 1127 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 CKS1BP1-201ENST00000555221 240 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 RNF138P2-201ENST00000603490 592 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AC097505.1-201ENST00000610199 565 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AL356490.1-201ENST00000623079 479 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 AC092162.3-201ENST00000624511 1624 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.75□□□□□ -1.65
HLA-DPA1P20036 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DPA1P20036 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC103591.2-201ENST00000265259 766 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 MIR585-201ENST00000384887 94 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 MIR1271-201ENST00000408537 86 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 RN7SKP267-201ENST00000410381 285 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 RBMY2KP-201ENST00000418221 992 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC004074.1-201ENST00000421810 1063 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AL049745.1-201ENST00000433953 286 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 ZFAND6P1-201ENST00000434138 605 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC008072.1-201ENST00000434254 824 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 RSL24D1P8-201ENST00000434442 492 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 CEACAMP1-201ENST00000434624 1035 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 ELOCP11-201ENST00000436690 332 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC016831.4-201ENST00000438302 307 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 ELOCP16-201ENST00000444494 332 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 RNA5SP103-201ENST00000459503 118 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC105233.1-201ENST00000498840 781 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AL110118.1-201ENST00000553543 400 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC079075.1-201ENST00000559543 878 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC091042.1-201ENST00000579213 173 ntBASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DPA1P20036 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 SALL4P2-201ENST00000423288 2910 ntBASIC4.73□□□□□ -1.65
HLA-DPA1P20036 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 VN2R3P-201ENST00000422626 1412 ntBASIC4.73□□□□□ -1.65
HLA-DPA1P20036 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 A2MP1-204ENST00000566278 4130 ntBASIC4.73□□□□□ -1.65
HLA-DPA1P20036 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 RNA5SP87-201ENST00000384155 118 ntBASIC4.73□□□□□ -1.65
HLA-DPA1P20036 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DPA1P20036 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms