Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.76□□□□□ -1.33
LIG1P18858 AC092266.1-201ENST00000610958 165 ntBASIC6.76□□□□□ -1.33
LIG1P18858 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.76□□□□□ -1.33
LIG1P18858 MIR6778-201ENST00000617912 73 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.76□□□□□ -1.33
LIG1P18858 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.76□□□□□ -1.33
LIG1P18858 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.76□□□□□ -1.33
LIG1P18858 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
LIG1P18858 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LIG1P18858 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LIG1P18858 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LIG1P18858 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
LIG1P18858 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
LIG1P18858 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.76□□□□□ -1.33
LIG1P18858 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.75□□□□□ -1.33
LIG1P18858 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIG1P18858 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
LIG1P18858 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIG1P18858 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIG1P18858 OR10J6P-201ENST00000289731 930 ntBASIC6.75□□□□□ -1.33
LIG1P18858 RNU6-543P-201ENST00000362576 108 ntBASIC6.75□□□□□ -1.33
LIG1P18858 Y_RNA.311-201ENST00000365068 96 ntBASIC6.75□□□□□ -1.33
LIG1P18858 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIG1P18858 MIR181A1-201ENST00000385026 110 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AC004386.1-201ENST00000393214 761 ntBASIC6.75□□□□□ -1.33
LIG1P18858 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.75□□□□□ -1.33
LIG1P18858 AP000357.1-201ENST00000409926 1165 ntBASIC6.75□□□□□ -1.33
LIG1P18858 RNU6-575P-201ENST00000411326 105 ntBASIC6.75□□□□□ -1.33
LIG1P18858 RPL35AP31-201ENST00000418340 337 ntBASIC6.75□□□□□ -1.33
LIG1P18858 UBTFL3-201ENST00000418934 1024 ntBASIC6.75□□□□□ -1.33
LIG1P18858 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LIG1P18858 B3GNT2P1-201ENST00000434960 952 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AC242426.1-201ENST00000435270 960 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.75□□□□□ -1.33
LIG1P18858 MTCO3P18-201ENST00000440206 761 ntBASIC6.75□□□□□ -1.33
LIG1P18858 MTND4LP16-201ENST00000440828 295 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.75□□□□□ -1.33
LIG1P18858 EPS15P1-201ENST00000448836 336 ntBASIC6.75□□□□□ -1.33
LIG1P18858 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.75□□□□□ -1.33
LIG1P18858 UBTFL6-201ENST00000477929 1024 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.75□□□□□ -1.33
LIG1P18858 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.75□□□□□ -1.33
LIG1P18858 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.75□□□□□ -1.33
LIG1P18858 MIR2117-201ENST00000516780 80 ntBASIC6.75□□□□□ -1.33
LIG1P18858 IGKV3D-25-201ENST00000519599 235 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.75□□□□□ -1.33
LIG1P18858 DEFB108A-201ENST00000530110 222 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
LIG1P18858 TXNP4-201ENST00000575018 310 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.75□□□□□ -1.33
LIG1P18858 AP005262.1-201ENST00000582646 997 ntBASIC6.75□□□□□ -1.33
LIG1P18858 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.75□□□□□ -1.33
LIG1P18858 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.75□□□□□ -1.33
LIG1P18858 VN1R92P-201ENST00000598511 928 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AC015871.2-201ENST00000603605 948 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AL122125.1-201ENST00000616999 600 ntBASIC6.75□□□□□ -1.33
LIG1P18858 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.75□□□□□ -1.33
LIG1P18858 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LIG1P18858 OR5H6-203ENST00000642105 978 ntBASIC6.75□□□□□ -1.33
LIG1P18858 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIG1P18858 AC008627.1-201ENST00000517511 1704 ntBASIC6.75□□□□□ -1.33
LIG1P18858 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIG1P18858 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIG1P18858 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
LIG1P18858 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIG1P18858 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.75□□□□□ -1.33
LIG1P18858 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIG1P18858 AC114774.1-201ENST00000507410 1770 ntBASIC6.74□□□□□ -1.33
LIG1P18858 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LIG1P18858 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LIG1P18858 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LIG1P18858 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 Y_RNA.70-201ENST00000362886 110 ntBASIC6.74□□□□□ -1.33
LIG1P18858 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LIG1P18858 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LIG1P18858 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIG1P18858 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
LIG1P18858 METTL15P3-201ENST00000415522 1221 ntBASIC6.74□□□□□ -1.33
LIG1P18858 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.74□□□□□ -1.33
LIG1P18858 MTCO1P54-201ENST00000430139 712 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AC000111.3-201ENST00000433478 193 ntBASIC6.74□□□□□ -1.33
LIG1P18858 TMX2P1-201ENST00000436507 708 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.74□□□□□ -1.33
LIG1P18858 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 HMGN1P2-201ENST00000445197 310 ntBASIC6.74□□□□□ -1.33
LIG1P18858 PAXBP1P1-201ENST00000449315 447 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AC104164.1-201ENST00000460282 590 ntBASIC6.74□□□□□ -1.33
LIG1P18858 AC023194.2-201ENST00000465398 406 ntBASIC6.74□□□□□ -1.33
LIG1P18858 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.74□□□□□ -1.33
LIG1P18858 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms