Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC112206.1-201ENST00000468416 477 ntBASIC7.12□□□□□ -1.27
TOP2AP11388 RPL5P12-201ENST00000477071 851 ntBASIC7.12□□□□□ -1.27
TOP2AP11388 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.12□□□□□ -1.27
TOP2AP11388 AC091516.1-201ENST00000549191 703 ntBASIC7.12□□□□□ -1.27
TOP2AP11388 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.12□□□□□ -1.27
TOP2AP11388 EOGT-210ENST00000615922 1931 ntBASIC7.12□□□□□ -1.27
TOP2AP11388 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TOP2AP11388 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.12□□□□□ -1.27
TOP2AP11388 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
TOP2AP11388 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TOP2AP11388 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.11□□□□□ -1.27
TOP2AP11388 AL161631.1-201ENST00000417933 486 ntBASIC7.11□□□□□ -1.27
TOP2AP11388 AP000907.1-201ENST00000428428 510 ntBASIC7.11□□□□□ -1.27
TOP2AP11388 RN7SL323P-201ENST00000494712 295 ntBASIC7.11□□□□□ -1.27
TOP2AP11388 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.11□□□□□ -1.27
TOP2AP11388 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.11□□□□□ -1.27
TOP2AP11388 PTS-202ENST00000524931 696 ntTSL 3 BASIC7.11□□□□□ -1.27
TOP2AP11388 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.11□□□□□ -1.27
TOP2AP11388 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TOP2AP11388 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TOP2AP11388 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TOP2AP11388 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TOP2AP11388 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TOP2AP11388 THAP12P5-201ENST00000405864 2275 ntBASIC7.11□□□□□ -1.27
TOP2AP11388 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
TOP2AP11388 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TOP2AP11388 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC7.11□□□□□ -1.27
TOP2AP11388 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TOP2AP11388 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC7.11□□□□□ -1.27
TOP2AP11388 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC7.11□□□□□ -1.27
TOP2AP11388 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC7.11□□□□□ -1.27
TOP2AP11388 AC005005.4-201ENST00000623789 16698 ntBASIC7.11□□□□□ -1.27
TOP2AP11388 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
TOP2AP11388 Y_RNA.333-201ENST00000365274 102 ntBASIC7.11□□□□□ -1.27
TOP2AP11388 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC7.11□□□□□ -1.27
TOP2AP11388 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.11□□□□□ -1.27
TOP2AP11388 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
TOP2AP11388 AC107993.1-201ENST00000591343 684 ntBASIC7.11□□□□□ -1.27
TOP2AP11388 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC7.11□□□□□ -1.27
TOP2AP11388 AC015726.1-201ENST00000602353 681 ntBASIC7.11□□□□□ -1.27
TOP2AP11388 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.11□□□□□ -1.27
TOP2AP11388 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC7.11□□□□□ -1.27
TOP2AP11388 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
TOP2AP11388 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TOP2AP11388 AL138820.1-201ENST00000617901 5305 ntBASIC7.1□□□□□ -1.27
TOP2AP11388 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TOP2AP11388 RBMY1KP-201ENST00000423480 476 ntBASIC7.1□□□□□ -1.27
TOP2AP11388 AC104306.1-201ENST00000449702 371 ntBASIC7.1□□□□□ -1.27
TOP2AP11388 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC7.1□□□□□ -1.27
TOP2AP11388 RPS3AP6-201ENST00000484430 795 ntBASIC7.1□□□□□ -1.27
TOP2AP11388 AC006499.6-201ENST00000511169 607 ntBASIC7.1□□□□□ -1.27
TOP2AP11388 PHBP17-201ENST00000528576 541 ntBASIC7.1□□□□□ -1.27
TOP2AP11388 AC063950.1-201ENST00000552036 308 ntBASIC7.1□□□□□ -1.27
TOP2AP11388 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.1□□□□□ -1.27
TOP2AP11388 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC7.1□□□□□ -1.27
TOP2AP11388 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TOP2AP11388 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.1□□□□□ -1.27
TOP2AP11388 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TOP2AP11388 AC024560.2-201ENST00000507981 1497 ntBASIC7.1□□□□□ -1.27
TOP2AP11388 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TOP2AP11388 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TOP2AP11388 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
TOP2AP11388 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TOP2AP11388 RPL21P17-201ENST00000397467 475 ntBASIC7.09□□□□□ -1.27
TOP2AP11388 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.09□□□□□ -1.27
TOP2AP11388 HMGN2P27-201ENST00000427352 270 ntBASIC7.09□□□□□ -1.27
TOP2AP11388 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.09□□□□□ -1.27
TOP2AP11388 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC7.09□□□□□ -1.27
TOP2AP11388 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.09□□□□□ -1.27
TOP2AP11388 MIR432-201ENST00000606207 94 ntBASIC7.09□□□□□ -1.27
TOP2AP11388 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TOP2AP11388 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TOP2AP11388 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TOP2AP11388 AL929601.4-201ENST00000613011 1341 ntBASIC7.09□□□□□ -1.27
TOP2AP11388 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.08□□□□□ -1.28
TOP2AP11388 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TOP2AP11388 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
TOP2AP11388 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
TOP2AP11388 TRIM60P17-201ENST00000415181 719 ntBASIC7.08□□□□□ -1.28
TOP2AP11388 MTCO1P54-201ENST00000430139 712 ntBASIC7.08□□□□□ -1.28
TOP2AP11388 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7.08□□□□□ -1.28
TOP2AP11388 RNU7-143P-201ENST00000516781 65 ntBASIC7.08□□□□□ -1.28
TOP2AP11388 RNA5SP179-201ENST00000517284 121 ntBASIC7.08□□□□□ -1.28
TOP2AP11388 MTND1P6-201ENST00000523621 946 ntBASIC7.08□□□□□ -1.28
TOP2AP11388 CYCSP30-201ENST00000546447 172 ntBASIC7.08□□□□□ -1.28
TOP2AP11388 AC017100.2-201ENST00000584628 355 ntBASIC7.08□□□□□ -1.28
TOP2AP11388 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC7.08□□□□□ -1.28
TOP2AP11388 AL357559.1-201ENST00000622228 274 ntBASIC7.08□□□□□ -1.28
TOP2AP11388 AP005264.7-201ENST00000625003 745 ntBASIC7.08□□□□□ -1.28
TOP2AP11388 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TOP2AP11388 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TOP2AP11388 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TOP2AP11388 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TOP2AP11388 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TOP2AP11388 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TOP2AP11388 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TOP2AP11388 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TOP2AP11388 MIR30B-201ENST00000384850 88 ntBASIC7.07□□□□□ -1.28
TOP2AP11388 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.07□□□□□ -1.28
TOP2AP11388 SKP1P3-201ENST00000429280 487 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms