Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
APOBP04114 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC2.51□□□□□ -2.01
APOBP04114 BX119904.3-201ENST00000428194 957 ntBASIC2.51□□□□□ -2.01
APOBP04114 AC005300.1-201ENST00000428401 373 ntBASIC2.51□□□□□ -2.01
APOBP04114 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.51□□□□□ -2.01
APOBP04114 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.51□□□□□ -2.01
APOBP04114 AL133162.1-201ENST00000463228 453 ntBASIC2.51□□□□□ -2.01
APOBP04114 AC104619.4-201ENST00000510773 249 ntBASIC2.51□□□□□ -2.01
APOBP04114 FTH1P9-201ENST00000513251 355 ntBASIC2.51□□□□□ -2.01
APOBP04114 NPM1P5-201ENST00000557228 838 ntBASIC2.51□□□□□ -2.01
APOBP04114 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC2.51□□□□□ -2.01
APOBP04114 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.51□□□□□ -2.01
APOBP04114 IMMP1LP1-201ENST00000605170 488 ntBASIC2.51□□□□□ -2.01
APOBP04114 U3.45-201ENST00000607547 219 ntBASIC2.51□□□□□ -2.01
APOBP04114 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 AL591135.1-201ENST00000401578 5914 ntBASIC2.51□□□□□ -2.01
APOBP04114 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC2.51□□□□□ -2.01
APOBP04114 MIR1179-201ENST00000408703 91 ntBASIC2.51□□□□□ -2.01
APOBP04114 AC018635.1-201ENST00000468292 1030 ntBASIC2.51□□□□□ -2.01
APOBP04114 AC017015.1-201ENST00000477387 286 ntBASIC2.51□□□□□ -2.01
APOBP04114 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.51□□□□□ -2.01
APOBP04114 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC2.51□□□□□ -2.01
APOBP04114 EIF4BP1-201ENST00000554881 351 ntBASIC2.51□□□□□ -2.01
APOBP04114 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC2.51□□□□□ -2.01
APOBP04114 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 AL442128.2-201ENST00000620246 1824 ntBASIC2.51□□□□□ -2.01
APOBP04114 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 RPS29P19-201ENST00000479709 171 ntBASIC2.51□□□□□ -2.01
APOBP04114 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
APOBP04114 AL031666.3-201ENST00000609320 1006 ntBASIC2.51□□□□□ -2.01
APOBP04114 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 AL137918.1-201ENST00000624542 1922 ntBASIC2.51□□□□□ -2.01
APOBP04114 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.51□□□□□ -2.01
APOBP04114 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.51□□□□□ -2.01
APOBP04114 RPL21P8-201ENST00000465083 535 ntBASIC2.51□□□□□ -2.01
APOBP04114 AC098799.1-201ENST00000504752 800 ntBASIC2.51□□□□□ -2.01
APOBP04114 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.51□□□□□ -2.01
APOBP04114 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC2.51□□□□□ -2.01
APOBP04114 AL049634.3-201ENST00000604968 457 ntBASIC2.51□□□□□ -2.01
APOBP04114 AC243312.2-201ENST00000623340 601 ntBASIC2.51□□□□□ -2.01
APOBP04114 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
APOBP04114 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
APOBP04114 AC068870.3-201ENST00000625077 2536 ntBASIC2.5□□□□□ -2.01
APOBP04114 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2.5□□□□□ -2.01
APOBP04114 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC2.5□□□□□ -2.01
APOBP04114 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 NPM1P37-201ENST00000403105 874 ntBASIC2.5□□□□□ -2.01
APOBP04114 AC005326.1-201ENST00000429197 123 ntBASIC2.5□□□□□ -2.01
APOBP04114 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.5□□□□□ -2.01
APOBP04114 AC009963.4-201ENST00000448535 339 ntBASIC2.5□□□□□ -2.01
APOBP04114 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC2.5□□□□□ -2.01
APOBP04114 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.5□□□□□ -2.01
APOBP04114 RPS26P28-201ENST00000470806 348 ntBASIC2.5□□□□□ -2.01
APOBP04114 RPL23AP65-201ENST00000475608 468 ntBASIC2.5□□□□□ -2.01
APOBP04114 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.5□□□□□ -2.01
APOBP04114 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC2.5□□□□□ -2.01
APOBP04114 AC107294.1-201ENST00000609524 467 ntBASIC2.5□□□□□ -2.01
APOBP04114 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.5□□□□□ -2.01
APOBP04114 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
APOBP04114 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC2.5□□□□□ -2.01
APOBP04114 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
APOBP04114 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.5□□□□□ -2.01
APOBP04114 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms