Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFAP04085 VN1R80P-201ENST00000597126 338 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AL355333.1-201ENST00000605632 279 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 OR10AB1P-201ENST00000609613 938 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 MIR6861-201ENST00000618657 64 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AP005212.3-201ENST00000619964 528 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC099654.6-201ENST00000636487 512 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC007114.2-201ENST00000576014 4281 ntBASIC6.36□□□□□ -1.39
PDGFAP04085 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFAP04085 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFAP04085 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFAP04085 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 AL049780.3-201ENST00000624612 1583 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.35□□□□□ -1.39
PDGFAP04085 MAPK10-344ENST00000641718 3746 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFAP04085 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
PDGFAP04085 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PDGFAP04085 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AL590004.1-201ENST00000405321 300 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 RNU6-373P-201ENST00000411247 98 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC211486.3-201ENST00000412694 621 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFAP04085 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 RPL23AP74-201ENST00000437246 471 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFAP04085 PRPF38AP1-201ENST00000451976 933 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC128716.1-201ENST00000475129 166 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC099340.1-201ENST00000475247 599 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 RN7SL654P-201ENST00000479178 292 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 RN7SL379P-201ENST00000479912 293 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 RPL7AP10-201ENST00000481016 791 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC005912.1-201ENST00000495392 255 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFAP04085 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFAP04085 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFAP04085 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFAP04085 AC007537.1-201ENST00000539347 327 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFAP04085 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFAP04085 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 AC005519.1-201ENST00000554490 601 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC009117.1-201ENST00000563948 554 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC037471.2-201ENST00000564941 598 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC034105.3-201ENST00000565294 442 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFAP04085 AC010928.3-201ENST00000587712 541 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AL589863.1-201ENST00000595383 631 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC121334.2-201ENST00000605387 271 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC061999.1-201ENST00000624454 177 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
PDGFAP04085 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFAP04085 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PDGFAP04085 AC130304.1-201ENST00000622942 2385 ntBASIC6.35□□□□□ -1.39
PDGFAP04085 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PDGFAP04085 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFAP04085 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.34□□□□□ -1.39
PDGFAP04085 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.34□□□□□ -1.39
PDGFAP04085 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PDGFAP04085 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.34□□□□□ -1.39
PDGFAP04085 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms