Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 AC126323.4-201ENST00000566935 234 ntBASIC7.66□□□□□ -1.18
RNF40O75150 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.66□□□□□ -1.18
RNF40O75150 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 AC007485.1-201ENST00000616755 206 ntBASIC7.66□□□□□ -1.18
RNF40O75150 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 AC006453.3-201ENST00000635891 377 ntBASIC7.66□□□□□ -1.18
RNF40O75150 CASC19-232ENST00000641480 1244 ntBASIC7.66□□□□□ -1.18
RNF40O75150 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.66□□□□□ -1.18
RNF40O75150 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF40O75150 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 AC090017.1-201ENST00000548612 1779 ntBASIC7.66□□□□□ -1.18
RNF40O75150 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF40O75150 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
RNF40O75150 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 SAMMSON-203ENST00000641005 2168 ntBASIC7.66□□□□□ -1.18
RNF40O75150 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RNF40O75150 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
RNF40O75150 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 Y_RNA.414-201ENST00000384011 101 ntBASIC7.65□□□□□ -1.18
RNF40O75150 RNU6-606P-201ENST00000384721 111 ntBASIC7.65□□□□□ -1.18
RNF40O75150 API5P2-201ENST00000397055 1498 ntBASIC7.65□□□□□ -1.18
RNF40O75150 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF40O75150 RN7SKP144-201ENST00000411108 279 ntBASIC7.65□□□□□ -1.18
RNF40O75150 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.65□□□□□ -1.18
RNF40O75150 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC7.65□□□□□ -1.18
RNF40O75150 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.65□□□□□ -1.18
RNF40O75150 RPS3AP54-201ENST00000435535 734 ntBASIC7.65□□□□□ -1.18
RNF40O75150 UBE2V1P5-201ENST00000440070 405 ntBASIC7.65□□□□□ -1.18
RNF40O75150 DDX3P2-201ENST00000446138 111 ntBASIC7.65□□□□□ -1.18
RNF40O75150 RPL7P52-201ENST00000449200 742 ntBASIC7.65□□□□□ -1.18
RNF40O75150 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF40O75150 AC104308.1-201ENST00000454621 333 ntBASIC7.65□□□□□ -1.18
RNF40O75150 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.65□□□□□ -1.18
RNF40O75150 RPL7P15-201ENST00000461190 712 ntBASIC7.65□□□□□ -1.18
RNF40O75150 AC128713.1-201ENST00000471495 306 ntBASIC7.65□□□□□ -1.18
RNF40O75150 AC005550.2-201ENST00000476382 318 ntBASIC7.65□□□□□ -1.18
RNF40O75150 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC7.65□□□□□ -1.18
RNF40O75150 AC095057.1-201ENST00000507583 168 ntBASIC7.65□□□□□ -1.18
RNF40O75150 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF40O75150 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.65□□□□□ -1.18
RNF40O75150 RNU6-1088P-201ENST00000516850 104 ntBASIC7.65□□□□□ -1.18
RNF40O75150 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 PHBP2-201ENST00000532859 806 ntBASIC7.65□□□□□ -1.18
RNF40O75150 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.65□□□□□ -1.18
RNF40O75150 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF40O75150 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF40O75150 AC008126.1-201ENST00000549019 480 ntBASIC7.65□□□□□ -1.18
RNF40O75150 IMMP1LP2-201ENST00000552954 492 ntBASIC7.65□□□□□ -1.18
RNF40O75150 DPPA3P2-201ENST00000553589 478 ntBASIC7.65□□□□□ -1.18
RNF40O75150 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF40O75150 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF40O75150 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC7.65□□□□□ -1.18
RNF40O75150 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF40O75150 MIR3942-201ENST00000585264 109 ntBASIC7.65□□□□□ -1.18
RNF40O75150 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF40O75150 AL096855.2-201ENST00000605785 369 ntBASIC7.65□□□□□ -1.18
RNF40O75150 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 uc_338.37-201ENST00000620113 186 ntBASIC7.65□□□□□ -1.18
RNF40O75150 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF40O75150 RN7SL680P-201ENST00000620379 299 ntBASIC7.65□□□□□ -1.18
RNF40O75150 AC006213.6-201ENST00000623722 4179 ntBASIC7.65□□□□□ -1.18
RNF40O75150 MAPK10-344ENST00000641718 3746 ntBASIC7.65□□□□□ -1.18
RNF40O75150 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF40O75150 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF40O75150 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.65□□□□□ -1.19
RNF40O75150 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF40O75150 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.65□□□□□ -1.19
RNF40O75150 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
RNF40O75150 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.65□□□□□ -1.19
RNF40O75150 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
RNF40O75150 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
RNF40O75150 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RNF40O75150 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF40O75150 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RNF40O75150 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF40O75150 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms