Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC007494.3-201ENST00000624660 743 ntBASIC5.25□□□□□ -1.57
PROM1O43490 AC092184.1-201ENST00000625042 715 ntBASIC5.25□□□□□ -1.57
PROM1O43490 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PROM1O43490 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.25□□□□□ -1.57
PROM1O43490 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PROM1O43490 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PROM1O43490 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.25□□□□□ -1.57
PROM1O43490 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PROM1O43490 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
PROM1O43490 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.24□□□□□ -1.57
PROM1O43490 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 AC092681.1-201ENST00000297369 291 ntBASIC5.24□□□□□ -1.57
PROM1O43490 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 RNU6-553P-201ENST00000364047 96 ntBASIC5.24□□□□□ -1.57
PROM1O43490 snoZ40.1-201ENST00000364540 72 ntBASIC5.24□□□□□ -1.57
PROM1O43490 RN7SKP6-201ENST00000364795 319 ntBASIC5.24□□□□□ -1.57
PROM1O43490 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 RSL24D1P4-201ENST00000400938 484 ntBASIC5.24□□□□□ -1.57
PROM1O43490 AL034374.1-201ENST00000406329 351 ntBASIC5.24□□□□□ -1.57
PROM1O43490 GPS2P1-201ENST00000411761 986 ntBASIC5.24□□□□□ -1.57
PROM1O43490 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.24□□□□□ -1.57
PROM1O43490 VTA1P1-201ENST00000414044 866 ntBASIC5.24□□□□□ -1.57
PROM1O43490 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.24□□□□□ -1.57
PROM1O43490 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 AC007394.1-201ENST00000421941 531 ntBASIC5.24□□□□□ -1.57
PROM1O43490 FMO7P-201ENST00000436045 768 ntBASIC5.24□□□□□ -1.57
PROM1O43490 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.24□□□□□ -1.57
PROM1O43490 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.24□□□□□ -1.57
PROM1O43490 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.24□□□□□ -1.57
PROM1O43490 IGBP1P3-201ENST00000447449 1000 ntBASIC5.24□□□□□ -1.57
PROM1O43490 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 RN7SL72P-201ENST00000460697 269 ntBASIC5.24□□□□□ -1.57
PROM1O43490 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 RN7SL809P-201ENST00000482040 297 ntBASIC5.24□□□□□ -1.57
PROM1O43490 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.24□□□□□ -1.57
PROM1O43490 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.24□□□□□ -1.57
PROM1O43490 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.24□□□□□ -1.57
PROM1O43490 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.24□□□□□ -1.57
PROM1O43490 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 AL136295.6-201ENST00000610486 658 ntBASIC5.24□□□□□ -1.57
PROM1O43490 AL592148.2-201ENST00000612210 372 ntBASIC5.24□□□□□ -1.57
PROM1O43490 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.24□□□□□ -1.57
PROM1O43490 AL359757.1-201ENST00000623176 255 ntBASIC5.24□□□□□ -1.57
PROM1O43490 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.24□□□□□ -1.57
PROM1O43490 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.24□□□□□ -1.57
PROM1O43490 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
PROM1O43490 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.24□□□□□ -1.57
PROM1O43490 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PROM1O43490 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PROM1O43490 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PROM1O43490 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PROM1O43490 AL603750.1-201ENST00000624216 1717 ntBASIC5.23□□□□□ -1.57
PROM1O43490 HSPA8P14-201ENST00000552265 1805 ntBASIC5.23□□□□□ -1.57
PROM1O43490 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PROM1O43490 RNA5SP132-201ENST00000364725 118 ntBASIC5.23□□□□□ -1.57
PROM1O43490 RNU4-31P-201ENST00000384211 141 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AL079342.2-201ENST00000403367 482 ntBASIC5.23□□□□□ -1.57
PROM1O43490 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.23□□□□□ -1.57
PROM1O43490 OR6E1P-201ENST00000414424 923 ntBASIC5.23□□□□□ -1.57
PROM1O43490 MTCO1P21-201ENST00000416634 589 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AC098592.1-201ENST00000419352 333 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.23□□□□□ -1.57
PROM1O43490 RPL21P43-201ENST00000425440 472 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.23□□□□□ -1.57
PROM1O43490 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.23□□□□□ -1.57
PROM1O43490 YWHAEP5-201ENST00000431545 765 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms