Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.56□□□□□ -1.84
SDCBPO00560 NFYAP1-201ENST00000431953 972 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 TXNP2-201ENST00000443918 295 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.56□□□□□ -1.84
SDCBPO00560 PHBP16-201ENST00000446318 950 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.56□□□□□ -1.84
SDCBPO00560 RPL7P32-201ENST00000457119 744 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.56□□□□□ -1.84
SDCBPO00560 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
SDCBPO00560 AC231760.1-201ENST00000498002 260 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 AC010374.1-201ENST00000503762 1237 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.56□□□□□ -1.84
SDCBPO00560 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.56□□□□□ -1.84
SDCBPO00560 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.56□□□□□ -1.84
SDCBPO00560 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SDCBPO00560 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
SDCBPO00560 AC008126.1-201ENST00000549019 480 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 SULT1C2P2-201ENST00000562517 294 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SDCBPO00560 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.56□□□□□ -1.84
SDCBPO00560 AC113403.1-201ENST00000604910 193 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 MIR7702-201ENST00000621931 59 ntBASIC3.56□□□□□ -1.84
SDCBPO00560 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SDCBPO00560 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SDCBPO00560 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SDCBPO00560 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SDCBPO00560 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.56□□□□□ -1.84
SDCBPO00560 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SDCBPO00560 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.56□□□□□ -1.84
SDCBPO00560 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SDCBPO00560 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
SDCBPO00560 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.55□□□□□ -1.84
SDCBPO00560 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 AL929601.4-201ENST00000613011 1341 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 SNORA37-201ENST00000384504 129 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SDCBPO00560 RNA5SP332-201ENST00000391063 115 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.55□□□□□ -1.84
SDCBPO00560 SNORA3C-201ENST00000408792 125 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 AC013268.2-201ENST00000420753 337 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.55□□□□□ -1.84
SDCBPO00560 RPL23AP1-201ENST00000428990 471 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.55□□□□□ -1.84
SDCBPO00560 GSTA7P-201ENST00000438425 448 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 RPL23AP2-201ENST00000471227 466 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.55□□□□□ -1.84
SDCBPO00560 SYT14P1-201ENST00000481459 721 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.55□□□□□ -1.84
SDCBPO00560 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.55□□□□□ -1.84
SDCBPO00560 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.55□□□□□ -1.84
SDCBPO00560 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.55□□□□□ -1.84
SDCBPO00560 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.55□□□□□ -1.84
SDCBPO00560 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.55□□□□□ -1.84
SDCBPO00560 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.55□□□□□ -1.84
SDCBPO00560 AC067931.1-201ENST00000624190 671 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 AL356121.2-201ENST00000624715 780 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 AC140479.6-201ENST00000633535 357 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 AC090017.1-201ENST00000548612 1779 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 AC245100.2-201ENST00000454544 1679 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 AL132640.2-201ENST00000559968 1698 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 AL137100.1-201ENST00000556703 1620 ntBASIC3.55□□□□□ -1.84
SDCBPO00560 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SDCBPO00560 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
SDCBPO00560 AL606537.1-201ENST00000607258 2011 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SDCBPO00560 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SDCBPO00560 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SDCBPO00560 AC093775.1-201ENST00000624154 1868 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.54□□□□□ -1.84
SDCBPO00560 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.54□□□□□ -1.84
SDCBPO00560 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.54□□□□□ -1.84
SDCBPO00560 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SDCBPO00560 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SDCBPO00560 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.54□□□□□ -1.84
SDCBPO00560 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.54□□□□□ -1.84
SDCBPO00560 RNU6-398P-201ENST00000384143 109 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 MIR708-201ENST00000390708 88 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 AL583835.1-201ENST00000399570 407 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 SNORA11F-201ENST00000408237 128 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.54□□□□□ -1.84
SDCBPO00560 RPL12P28-201ENST00000430852 489 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.54□□□□□ -1.84
SDCBPO00560 AL138878.2-201ENST00000440581 1241 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.54□□□□□ -1.84
SDCBPO00560 HMGB3P22-202ENST00000451823 572 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.54□□□□□ -1.84
SDCBPO00560 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.54□□□□□ -1.84
SDCBPO00560 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.54□□□□□ -1.84
SDCBPO00560 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.54□□□□□ -1.84
SDCBPO00560 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms