Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC116562.4-201ENST00000641316 2276 ntBASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB13Q9Y5F0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 AL359736.2-201ENST00000621992 437 ntBASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB13Q9Y5F0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 AC007952.6-201ENST00000573168 2673 ntBASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 AC003957.1-201ENST00000625108 2673 ntBASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 FAM197Y4-202ENST00000622692 608 ntBASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB13Q9Y5F0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 AC142381.4-202ENST00000563973 229 ntBASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 C1QL1P1-201ENST00000568105 661 ntBASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB13Q9Y5F0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 AC093484.2-201ENST00000580996 2166 ntBASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.4■■□□□ 1.02
PCDHB13Q9Y5F0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms