Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 LST1-206ENST00000376090 689 ntTSL 2 BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 LST1-209ENST00000376096 565 ntTSL 2 BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 LST1-210ENST00000376099 610 ntTSL 2 BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 LST1-214ENST00000418507 726 ntTSL 2 BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 AC092329.2-201ENST00000598402 547 ntBASIC18.36■□□□□ 0.53
LHX6Q9UPM6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 BNIP3P41-202ENST00000616656 861 ntBASIC18.36■□□□□ 0.53
LHX6Q9UPM6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.36■□□□□ 0.53
LHX6Q9UPM6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 AC011484.1-201ENST00000377652 1995 ntBASIC18.35■□□□□ 0.53
LHX6Q9UPM6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 AC007663.1-201ENST00000438948 1240 ntBASIC18.35■□□□□ 0.53
LHX6Q9UPM6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.35■□□□□ 0.53
LHX6Q9UPM6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 SLC25A1P2-201ENST00000430693 912 ntBASIC18.34■□□□□ 0.53
LHX6Q9UPM6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LHX6Q9UPM6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.33■□□□□ 0.53
LHX6Q9UPM6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
LHX6Q9UPM6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LHX6Q9UPM6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.33■□□□□ 0.53
LHX6Q9UPM6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.33■□□□□ 0.53
LHX6Q9UPM6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LHX6Q9UPM6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 AL390728.6-201ENST00000566446 1246 ntBASIC18.33■□□□□ 0.52
LHX6Q9UPM6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 AL031008.1-201ENST00000619963 541 ntBASIC18.33■□□□□ 0.52
LHX6Q9UPM6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms