Protein–RNA interactions for Protein: Q9UM07

PADI4, Protein-arginine deiminase type-4, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PADI4Q9UM07 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PADI4Q9UM07 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PADI4Q9UM07 AL353807.1-201ENST00000427475 662 ntBASIC19.42■□□□□ 0.7
PADI4Q9UM07 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.42■□□□□ 0.7
PADI4Q9UM07 FAM210CP-201ENST00000445714 574 ntBASIC19.42■□□□□ 0.7
PADI4Q9UM07 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.42■□□□□ 0.7
PADI4Q9UM07 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.42■□□□□ 0.7
PADI4Q9UM07 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.42■□□□□ 0.7
PADI4Q9UM07 AC026471.5-201ENST00000615068 467 ntBASIC19.42■□□□□ 0.7
PADI4Q9UM07 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PADI4Q9UM07 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PADI4Q9UM07 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PADI4Q9UM07 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PADI4Q9UM07 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PADI4Q9UM07 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PADI4Q9UM07 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PADI4Q9UM07 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PADI4Q9UM07 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PADI4Q9UM07 FP700111.2-201ENST00000619190 1892 ntBASIC19.41■□□□□ 0.7
PADI4Q9UM07 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PADI4Q9UM07 AC020907.5-201ENST00000624372 1936 ntBASIC19.41■□□□□ 0.7
PADI4Q9UM07 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PADI4Q9UM07 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PADI4Q9UM07 TNXA-203ENST00000507684 2038 ntBASIC19.41■□□□□ 0.7
PADI4Q9UM07 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PADI4Q9UM07 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PADI4Q9UM07 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PADI4Q9UM07 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 AC004264.1-201ENST00000608354 794 ntBASIC19.41■□□□□ 0.7
PADI4Q9UM07 AC133561.5-201ENST00000635547 218 ntBASIC19.41■□□□□ 0.7
PADI4Q9UM07 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PADI4Q9UM07 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 LETM1P2-201ENST00000597330 2178 ntBASIC19.41■□□□□ 0.7
PADI4Q9UM07 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PADI4Q9UM07 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PADI4Q9UM07 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.41■□□□□ 0.7
PADI4Q9UM07 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 AC087499.1-201ENST00000418141 1075 ntBASIC19.4■□□□□ 0.7
PADI4Q9UM07 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 AL355355.2-201ENST00000442321 338 ntBASIC19.4■□□□□ 0.7
PADI4Q9UM07 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 CD177P1-201ENST00000606252 935 ntBASIC19.4■□□□□ 0.7
PADI4Q9UM07 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.4■□□□□ 0.7
PADI4Q9UM07 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PADI4Q9UM07 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PADI4Q9UM07 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PADI4Q9UM07 AL162377.1-201ENST00000618844 1793 ntBASIC19.39■□□□□ 0.7
PADI4Q9UM07 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
PADI4Q9UM07 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.39■□□□□ 0.69
PADI4Q9UM07 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PADI4Q9UM07 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PADI4Q9UM07 AP003071.4-201ENST00000562276 1284 ntBASIC19.39■□□□□ 0.69
PADI4Q9UM07 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.39■□□□□ 0.69
PADI4Q9UM07 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.39■□□□□ 0.69
PADI4Q9UM07 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PADI4Q9UM07 KRT8P20-201ENST00000423953 1409 ntBASIC19.39■□□□□ 0.69
PADI4Q9UM07 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PADI4Q9UM07 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PADI4Q9UM07 PTBP1P-201ENST00000554374 1601 ntBASIC19.39■□□□□ 0.69
PADI4Q9UM07 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.39■□□□□ 0.69
PADI4Q9UM07 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PADI4Q9UM07 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PADI4Q9UM07 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PADI4Q9UM07 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PADI4Q9UM07 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PADI4Q9UM07 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PADI4Q9UM07 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PADI4Q9UM07 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PADI4Q9UM07 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PADI4Q9UM07 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms