Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 CRYGFP-201ENST00000418459 633 ntBASIC17.82■□□□□ 0.44
LRFN1Q9P244 AC004951.3-201ENST00000418645 1148 ntBASIC17.82■□□□□ 0.44
LRFN1Q9P244 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 AC011298.2-201ENST00000617989 482 ntBASIC17.82■□□□□ 0.44
LRFN1Q9P244 AC005363.2-201ENST00000618631 242 ntBASIC17.82■□□□□ 0.44
LRFN1Q9P244 AC130371.2-201ENST00000619443 611 ntBASIC17.82■□□□□ 0.44
LRFN1Q9P244 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 KRT18P22-201ENST00000402024 1347 ntBASIC17.81■□□□□ 0.44
LRFN1Q9P244 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 RCN1P1-201ENST00000400413 996 ntBASIC17.81■□□□□ 0.44
LRFN1Q9P244 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 AP005242.2-201ENST00000580065 1175 ntBASIC17.81■□□□□ 0.44
LRFN1Q9P244 AC010947.1-201ENST00000623454 693 ntBASIC17.81■□□□□ 0.44
LRFN1Q9P244 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.81■□□□□ 0.44
LRFN1Q9P244 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRFN1Q9P244 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 C2orf69P3-201ENST00000565542 1120 ntBASIC17.8■□□□□ 0.44
LRFN1Q9P244 SLC25A1P4-201ENST00000567977 778 ntBASIC17.8■□□□□ 0.44
LRFN1Q9P244 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN1Q9P244 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
LRFN1Q9P244 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 LINC01006-201ENST00000333319 2292 ntBASIC17.79■□□□□ 0.44
LRFN1Q9P244 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 AC099778.1-201ENST00000568593 1911 ntBASIC17.79■□□□□ 0.44
LRFN1Q9P244 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN1Q9P244 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.79■□□□□ 0.44
LRFN1Q9P244 AL160286.2-201ENST00000567150 934 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms