Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AP005242.2-201ENST00000580065 1175 ntBASIC20.94■□□□□ 0.94
CNTN3Q9P232 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.94■□□□□ 0.94
CNTN3Q9P232 AP000692.2-201ENST00000608391 879 ntBASIC20.94■□□□□ 0.94
CNTN3Q9P232 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.94■□□□□ 0.94
CNTN3Q9P232 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTN3Q9P232 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTN3Q9P232 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTN3Q9P232 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTN3Q9P232 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.94■□□□□ 0.94
CNTN3Q9P232 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.94■□□□□ 0.94
CNTN3Q9P232 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTN3Q9P232 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTN3Q9P232 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTN3Q9P232 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTN3Q9P232 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTN3Q9P232 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTN3Q9P232 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTN3Q9P232 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 AC091390.4-202ENST00000476426 537 ntBASIC20.92■□□□□ 0.94
CNTN3Q9P232 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.92■□□□□ 0.94
CNTN3Q9P232 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTN3Q9P232 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTN3Q9P232 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTN3Q9P232 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTN3Q9P232 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CNTN3Q9P232 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTN3Q9P232 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTN3Q9P232 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTN3Q9P232 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTN3Q9P232 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTN3Q9P232 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTN3Q9P232 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTN3Q9P232 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTN3Q9P232 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTN3Q9P232 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTN3Q9P232 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTN3Q9P232 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTN3Q9P232 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.91■□□□□ 0.94
CNTN3Q9P232 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTN3Q9P232 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTN3Q9P232 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.9■□□□□ 0.94
CNTN3Q9P232 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CNTN3Q9P232 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTN3Q9P232 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.9■□□□□ 0.94
CNTN3Q9P232 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.9■□□□□ 0.94
CNTN3Q9P232 AC097488.1-201ENST00000507834 756 ntBASIC20.9■□□□□ 0.94
CNTN3Q9P232 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTN3Q9P232 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTN3Q9P232 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTN3Q9P232 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTN3Q9P232 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
CNTN3Q9P232 KRT8P41-201ENST00000533985 1514 ntBASIC20.89■□□□□ 0.94
CNTN3Q9P232 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.89■□□□□ 0.94
CNTN3Q9P232 CYP2D8P-201ENST00000433633 1490 ntBASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms