Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNIP1Q9NZI2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNIP1Q9NZI2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNIP1Q9NZI2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 MIPEPP3-201ENST00000412105 444 ntBASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 AC083906.2-201ENST00000511578 360 ntBASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 AC005829.2-201ENST00000571422 1056 ntBASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 RAP2CP1-201ENST00000605103 478 ntBASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNIP1Q9NZI2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 DUSP5P2-201ENST00000426873 1033 ntBASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 AC073210.2-201ENST00000430369 194 ntBASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KCNIP1Q9NZI2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 CROCCP5-201ENST00000436658 830 ntBASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 AC092118.2-201ENST00000613495 667 ntBASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 AL032819.2-201ENST00000624543 2162 ntBASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KCNIP1Q9NZI2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
KCNIP1Q9NZI2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KCNIP1Q9NZI2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.27■□□□□ 0.2
KCNIP1Q9NZI2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms