Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 AL355355.2-201ENST00000442321 338 ntBASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 NUDT16P1-203ENST00000513809 620 ntBASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 AP003071.4-201ENST00000562276 1284 ntBASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 AL158211.5-201ENST00000623583 2518 ntBASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPHK1Q9NYA1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 KRT17P2-201ENST00000300992 1314 ntBASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPHK1Q9NYA1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 AL355075.4-201ENST00000554988 638 ntBASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 AL031985.4-201ENST00000642138 673 ntBASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SPHK1Q9NYA1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SPHK1Q9NYA1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 REXO1L10P-201ENST00000615707 1290 ntBASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 REXO1L12P-201ENST00000622156 912 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms