Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS45Q9NRW7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 AFG3L1P-217ENST00000557444 2447 ntBASIC20.04■□□□□ 0.8
VPS45Q9NRW7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS45Q9NRW7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 UNC93B2-201ENST00000285383 730 ntBASIC20.03■□□□□ 0.8
VPS45Q9NRW7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 RBM17P1-201ENST00000453646 1190 ntBASIC20.03■□□□□ 0.8
VPS45Q9NRW7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS45Q9NRW7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 LINC01568-207ENST00000641790 1380 ntBASIC20.02■□□□□ 0.8
VPS45Q9NRW7 AC018553.1-201ENST00000616682 1458 ntBASIC20.02■□□□□ 0.8
VPS45Q9NRW7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS45Q9NRW7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS45Q9NRW7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
VPS45Q9NRW7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS45Q9NRW7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.02■□□□□ 0.79
VPS45Q9NRW7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VPS45Q9NRW7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 NBPF21P-201ENST00000425093 1451 ntBASIC20.01■□□□□ 0.79
VPS45Q9NRW7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 NUDT16P1-203ENST00000513809 620 ntBASIC20.01■□□□□ 0.79
VPS45Q9NRW7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.01■□□□□ 0.79
VPS45Q9NRW7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS45Q9NRW7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20■□□□□ 0.79
VPS45Q9NRW7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20■□□□□ 0.79
VPS45Q9NRW7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20■□□□□ 0.79
VPS45Q9NRW7 AC125437.2-201ENST00000625180 2167 ntBASIC20■□□□□ 0.79
VPS45Q9NRW7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VPS45Q9NRW7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20■□□□□ 0.79
VPS45Q9NRW7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20■□□□□ 0.79
VPS45Q9NRW7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS45Q9NRW7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms